| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_25440 |
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| Symbol | |
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| ID | 8396432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2817421 |
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| End bp | 2818563 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644987289 |
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| Product | cysteine desulfurase family protein |
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| Protein accession | YP_003144900 |
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| Protein GI | 257065228 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01977] cysteine desulfurase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0587445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTTACT TCGACAATGC GGCTACAACC ATGTTGAAGC CGCCTGCGGT CGCCGAGGCG
GTGGCCCGCG CCATCACGTC TTTCGGTGGT GTGGGGCGTG GCGTGCACGA AGCGTCTCTC
GATGCGGGCA TGACGGTGTT CATGGCGCGC CAGAAAATAT CCGACCTGTT CGGCGGACCG
GGTCCGAAGC AAGTCGCATT CACCAGCAAT GTGACCGAGG CGCTCAACAT CGTGGTGTAC
GGCCTCATGC AGCCTGGCGA CCACGCTGTC ACCACGGCGG CCTCGCACAA TTCGGTGCTC
CGCCCGCTGT TCAGGCTTCA GGACGAAGGT CAGGCCGACC TTACGGTCGT CCCCATCGCA
CCTGACGGCG GCATCGACTA CGACGAGTTC GAGGCGGCGT TCGGTCCCAA GACCAAGCTG
GCAGTCATCG GCCATGCGTC CAATCTGACC GGCGATGTGT ACGACATCGC CCGCATGGCG
GACATCGCCC ATGCCCATGG GGCTCTTATC GTGGTGGATG CGGCCCAGAC CGCAGGCACC
GTGCCCATCG ACATGGCGGC CCAGCATCTT GACGTCGTGT GCTTCACCGG GCACAAGAGC
CTGTTCGGAC CTCAGGGTAC GGGCGGCATG TGCGTGGCCG AAGGCATCGA CATCAAGGCG
ATCAAGGTCG GCGGCTCCGG CACGCACAGC TACGACCGCG TGCATCCCGA CTTCATGCCC
GAGCATCTCG AGGCAGGCAC CCTCAACGCC CATGGTCTGG CGGGCCTTCT GGCCGGTCTT
ACCTATATAG AAGAGAAGGG CGTGGATGCC GTGCACGAGA AGACCTGCGC CCTTGCGGAT
CGTTTCGAGG CAGGCGTGAA GGACATTCCC GGCATCAAGA TCTACGGCGG CGGGGCAAGC
GGACGCACGG GCATCGTTGC CCTCAACCTG GCCGACGTGG ACTCTTCGCT CGTATCCGAC
CTGCTCAACA CGCAGTTTGA GATCTGCACC CGCGCGGGTG CCCACTGCGC TCCGCTGATG
CATATGGCCA TCGGCACCGA GCAGCAAGGC GCGGTGCGCT TCAGTTTCTC CCATCTGAAC
ACCGAAGAGG AAGTCGACGC CGGCATTGCG GCGCTTAAGG AAATCGCACA GGAGGTTTGC
TAA
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| Protein sequence | MIYFDNAATT MLKPPAVAEA VARAITSFGG VGRGVHEASL DAGMTVFMAR QKISDLFGGP
GPKQVAFTSN VTEALNIVVY GLMQPGDHAV TTAASHNSVL RPLFRLQDEG QADLTVVPIA
PDGGIDYDEF EAAFGPKTKL AVIGHASNLT GDVYDIARMA DIAHAHGALI VVDAAQTAGT
VPIDMAAQHL DVVCFTGHKS LFGPQGTGGM CVAEGIDIKA IKVGGSGTHS YDRVHPDFMP
EHLEAGTLNA HGLAGLLAGL TYIEEKGVDA VHEKTCALAD RFEAGVKDIP GIKIYGGGAS
GRTGIVALNL ADVDSSLVSD LLNTQFEICT RAGAHCAPLM HMAIGTEQQG AVRFSFSHLN
TEEEVDAGIA ALKEIAQEVC
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