Gene Shel_24090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_24090 
Symbol 
ID8396297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2666779 
End bp2667408 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content57% 
IMG OID644987155 
Producttranscriptional regulator 
Protein accessionYP_003144766 
Protein GI257065094 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA CAACCGCAAC ACAGCAGGCC ATTCTAGACA GTGCACGGCG CCATTTTTCG 
GAAAAGGGCT TCCGCGGGGC CTCTCTCAAC CAGATTGTAA AGGATGCGGG CTTCACCAAA
GGCGCGTTCT ACGGGTATTA CGCCAGCAAG GAGGAGCTGT TCCATGCGCT GGTCAGCGAC
ACCTTCGAGG GCATGAGCCG TATCCTGGGG TCGATGACGG CGCAATGGCA GAGCTATCCC
GACGAGGAAC GCGTGGGCCA GTTGCCTGAA GCCTATCTCG ATCACCTGCC TGAACTGGTC
GATTTCTTCT TCGAACACCG TGACGACATG CGTCTTATCC TGACTAGATC CGAAGGCACG
CGGTATGAGA ACTTCCTGCA GGATTTCAGC GGGCGGAACA TCGCGCGCAT TGGGGAAGTC
CTGGAGCGGG CACATCTGGA AGGGTGCATC GATCCGGACG TATTCGGTAT GGTTATGGGC
TCGTACTACT CGATGCTGGC CCAAATCGTG GTGAGCGATT GCCCGCGTGA AGAGGTGTAT
TCGAAGATGC GCGATGTCCA GACGGTGTTC CAGCACGGCT TGCTGGCGCT TTTGGACAGC
GGCAATCATG GTGGGGAGAT GCATGCGTAA
 
Protein sequence
MTETTATQQA ILDSARRHFS EKGFRGASLN QIVKDAGFTK GAFYGYYASK EELFHALVSD 
TFEGMSRILG SMTAQWQSYP DEERVGQLPE AYLDHLPELV DFFFEHRDDM RLILTRSEGT
RYENFLQDFS GRNIARIGEV LERAHLEGCI DPDVFGMVMG SYYSMLAQIV VSDCPREEVY
SKMRDVQTVF QHGLLALLDS GNHGGEMHA