Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_23800 |
Symbol | |
ID | 8396269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2636872 |
End bp | 2639685 |
Gene Length | 2814 bp |
Protein Length | 937 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644987127 |
Product | AMP-forming long-chain acyl-CoA synthetase |
Protein accession | YP_003144738 |
Protein GI | 257065066 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAA CCAGCTGTCA CCACGTTCTG CTCACCGGCG CCACCGGGTT TTTGGGCACG CGTCTGGCCG AAGAGCTCGT CAAACGCGGT CATGCGGTGT ATGCCGTGGT GCGGCCTTCA GGCCAGCTGA ATGCAGAACA GCGCCTGGCC CGCCTGTGGT ACGAAAACGC CACACTGAAA CCGGCACTGG GCACCCAGGT CGTGCCTTTG GACGGATGCA TCACGAAGCA CATGCTCGGT TTGGACGAAA CCACCGTCGA CATGCTGTGC GGCCAGGTCG ACACGGTGAT CCACGCCGCT GCCGACGTCA ACATCAACCA GACCATCGAG GTGCTTCGCC AGGCCAACGT GGAAGCCACC GGCCATATTC TCAATCTTGC CGAACGGATC AACGAACGTC GTCCGCTTCA TCGGTTCATG CATGTGTCCA CGGCCTACGT CGCCGGCAAA CGCAGCGGAC TCATCGATGA GGAGTCCTTC GAAAACCGTG GGTTCAACAG CCTGTACGAG CAGACGAAAT TCGAAGCTGA AGAACTGGTG CGCAGCCGGG CGGAATCCAT GCCTGTCACC GTGCTGCGTC CTGCCCAAAT GGTGGGAGAC TCCTGCACGG GCTGGATCAC CTCGTTCAAC ACCGTGTACT ACCCGCTGAA GATGTACCTG AAGGGCATGC TGCCGATCAT CCCCGTCGCA GCCGATCAGA GGCTCAATAT CGTGCCCGTC GATTACGTCG CTAGCATCGC CATGGCCGCA TTGGACTCCC CCAAGGCCGT CGGAACCACC TACCACTGCA CCATGCCCGC CCGCCTGCAG CCCACCGTTG GCGACATCGT CGAAACGACC CGCGGATGGG CTCGGCTGGA ACTTGGCGTG AAGCTGCAAA AGCCCGTGTA CGTAAGTTCG ACCGAGCTGG GATCGTTGGG ATCCAACCGC AACCTGAAGC GGGCTTCGCA AGAAAAGAAG AAGGGCTTTC TGTCGAACAT GCTGGCCCTT TCTCCGTATT TCAACGACGA GCACGTCTTC TCGACCGACA ACACCGAGAA GCTCATGGGC ACCTGCACGC TGAGCTGGCG CTCCATTCTT CCCGTAATGC TCAGGTACGC CGTCGACCGC AGCTTCCTGA AACACACGGG CCGCACTGCT TTCGAGCAGA TGCTGGTCAG GTTGTCGTCG AAACGCAGCT CCATCTCGTA TTTCGACGTG ACGGACGAAG GCGTGCGCGA AACCACCGCC GACCAGATGA AGGAGCAGGT CCTCACGCTG GCCGCCGCGC TGCGTTCGGT GGGCATCCGG CCTGGCGACC GCGTAGCGCT GGTGGGCGTG AACTCTTCGG CCTACACGTC GGTGGATGCC GCCATCGGCT TGGTCGGAGG CGTAAGCGTG CCGCTGTACT ACACGTCGCC CTATGCGGAC ATCCGCCAAT TCGTGAACCG AAGCCACGCG AAACTCCTGT TCATCGGTAT GGAGAAACTG GCGCGCGCCG CCGCCGAGGA TGATCCGGGT ATCCCCTGCG TGCTCATGCC GCCCATCGCC ACCCTTGAGA ACCTGCCCGA AACTATCACG CCTTGGGAAG TGTTTCTGGG CATCGGACGC ACCGCCGATG ACAAGGCGAA GGCCCTTCCT GCCGTCGGTT ACGACGACAT CGCCACCATT CGCTACACAT CGGGCACCAC CGGGCTGCCC AAGGGCACCA TGTTCAACCA CTACCAGTTG GCGTGGATGG GCCAGACCAT GCCCGAAATA CTGGACTGGA AGACCCGCAA CGCCCCCAAT CGGTACCTGT CGTTTTTGCC CATGAGCCAC GTGGTCGAGG GCATCCTTGT GGCCTACGCA CCGTTTTACC TGCTCAGCGA TGTGGAAGTG TACTGCCTGA ATGACTTCTC CAAACTGACC GAAACGCTGC CGAAGGTACG TCCCACCATC TTCTTCTCGG TCCCCCGCTT CTACGAGAAA GTCTGGAACC AGTTCGCAGC CACCGCCGCC GGCAAGCGCT ACCTGGCCAT GAAGCCGGGC CCGGCCAAGA AGGCCTTCGC CCGCATCTGC AAGCGCGCCA TCCTCAAGAA GGCGGGGCTG GACGCATGCC GCCAGCTCAT CGTGGGGTCG GCCCCTATCC GCAACGACCT GCTGGAAGCC TACCGCGAGC TGGGCATCGA AATCCATAAC GCGTTCGGCC TGACCGAGGC CCCGCTCATC ACCCTCAACC GCATGGGTCG AAACGACCTG GGCAGTTTGG GACAGGCCCT GCCCCAAACC GATCTGAAGA TTGACGGCAC CGGGGAAATT TGGATGCGCG GCCCGCAGCT GACCGTGGGA TACGACGGCA TGGGCCCCCT TCCCGTGGAC GACGAAGGTT ATTTCGCCAC GGGTGATCTG GGATCGTTGT CGCCGCAAGG CAATGTGGTC ATCCAAGGGC GCCGCAAGGA ACTGGTCGTG ACCTCTTACG GCAAGAATGT CCAATCCGAA AAGATAGAAG CCCTGGTCAA GTCAATCCCT GGTGTAAGCG AAGCCATGCT TGTAGGCGAC GGGCGCCCGT ACTGCACCGG CCTGATCTGG CTGGAAGACG ACGCCGAGCT TGACGCGCAG GCTTTCGACG CGGCCATCCT GAAGATGAAC GAAGGCCTTT CTCACCCCGA GATGCTCAAG CGTTGGGCCG TTATGGAACG CCCTCTGGCG CTGTCCAGCG GCGAGCTCAC GCCCAACCTG AAGATGCGCC GCAAGGTCAT TCTCGAGCAT TATCCCCAGG TCATCGAGGC GCTTTACGAT GAATCCGGCC TGCATGGGGC CGTTGGCGCC ATGCACATAG GAGCCATGTC GTGA
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Protein sequence | MPETSCHHVL LTGATGFLGT RLAEELVKRG HAVYAVVRPS GQLNAEQRLA RLWYENATLK PALGTQVVPL DGCITKHMLG LDETTVDMLC GQVDTVIHAA ADVNINQTIE VLRQANVEAT GHILNLAERI NERRPLHRFM HVSTAYVAGK RSGLIDEESF ENRGFNSLYE QTKFEAEELV RSRAESMPVT VLRPAQMVGD SCTGWITSFN TVYYPLKMYL KGMLPIIPVA ADQRLNIVPV DYVASIAMAA LDSPKAVGTT YHCTMPARLQ PTVGDIVETT RGWARLELGV KLQKPVYVSS TELGSLGSNR NLKRASQEKK KGFLSNMLAL SPYFNDEHVF STDNTEKLMG TCTLSWRSIL PVMLRYAVDR SFLKHTGRTA FEQMLVRLSS KRSSISYFDV TDEGVRETTA DQMKEQVLTL AAALRSVGIR PGDRVALVGV NSSAYTSVDA AIGLVGGVSV PLYYTSPYAD IRQFVNRSHA KLLFIGMEKL ARAAAEDDPG IPCVLMPPIA TLENLPETIT PWEVFLGIGR TADDKAKALP AVGYDDIATI RYTSGTTGLP KGTMFNHYQL AWMGQTMPEI LDWKTRNAPN RYLSFLPMSH VVEGILVAYA PFYLLSDVEV YCLNDFSKLT ETLPKVRPTI FFSVPRFYEK VWNQFAATAA GKRYLAMKPG PAKKAFARIC KRAILKKAGL DACRQLIVGS APIRNDLLEA YRELGIEIHN AFGLTEAPLI TLNRMGRNDL GSLGQALPQT DLKIDGTGEI WMRGPQLTVG YDGMGPLPVD DEGYFATGDL GSLSPQGNVV IQGRRKELVV TSYGKNVQSE KIEALVKSIP GVSEAMLVGD GRPYCTGLIW LEDDAELDAQ AFDAAILKMN EGLSHPEMLK RWAVMERPLA LSSGELTPNL KMRRKVILEH YPQVIEALYD ESGLHGAVGA MHIGAMS
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