Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_23550 |
Symbol | |
ID | 8396244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2608136 |
End bp | 2609848 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644987102 |
Product | prolyl-tRNA synthetase, family II |
Protein accession | YP_003144713 |
Protein GI | 257065041 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0442] Prolyl-tRNA synthetase |
TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000284536 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0091674 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACAAAC ATCTCAACCG CAACATCCTG CGCATGAGCA CTATGTATGT GCCCACGCTG AAGGAGGACC CTTCGGATGC CGACATCCCT TCGGCTAAGC TGCTGACCCG TGCGGGCATG ATCCGCAAGG AGGCCGCCGG CCTGTACTCC TTCCTGCCGC TGGGCCTGCG TGTGCTGCGC AAGATCGAGA ACATCGTCCG TGAGGAGATG GACTCCCACG GCGGCGAGGA GCTGCTGATG CCCTTCGTGC AGTCCGCCGA CCTGTGGCGC CAGAGCGGCC GTTGGGGCGC GTACGGCGAA GAGATGATGA CCATGCGTGA CCGCCACGAC AACGAGTTCT GCCTCGGCCC CACCGCCGAA GAGGTCATCA CCGACCTGGT GAAGAACGAG CTTCGCAGCT ACAAGGACCT GCCGAAGAAC CTCTACCACA TTCAGCTCAA GTTCCGCGAC GAGCGCCGTC CCCGCTTCGG CCTGCTGCGC AGCCGCGAGT TCATCATGAA GGACGCCTAT TCTTTCGATA AGGACCAGGA AGGTCTGGAG GTCAACTATC AGCTGATGCG CGACGCCTAC AGCAGGATGT GCGAGCGCAT GGGCATGGAG TACCGCATCG TCCAGGCCGA CCCGGGCGAA ATCGGCGGCA ACGGCACCGA GGAGTTCATG ACCTTGGCCG AAACCGGCGA GGCCGAGCTG GTCTACTGCG ACTGCGGCTA CGCCGCCGAC GTCGAGGTGG GCGAGTGCCA TCCCAACCCC GTCGGATACG TCGGCGACAC CATGGAGAAG ATCGCCACGC CTGGCCTGCA CACCATCGAA GAGCTGGCCG ATTTCCTGGG CATCGAGGCC GACGGCACCG TCAAGGCGTT CTCCGGCAAG GACAAGGAAG GCGCCATCTG GGTGCTGTTC GTCCCTGGAA ACTACGAAGT GAACGAGGAC AAGGCGGCGC ATGTGGTGCG CGGCTTCGAG CCTCTTACCG ATGAGGAAAT GAAGGATGCG GGCCTGGTCA AGGGCTCTAT GGGACCGGTC GGTCTACCCG AAGGCGTGCG CATCTGTGCT GACGACAGCC TGCGCGACGT CGAGCGCTGG ATTGTCGGCG CCAACGAGGA GGGCTACCAC CTGCTCGGCG CCAAGCAGGG CGAAGACTTC ACGGTCGACG CCTGGGGCGA TTTGTGCACC GTCGTCGCCG GCGATGCCTG CCCCTGCTGC GGCAAGCCCC TGCAGGCCGC CCGCGGCATC GAGGTCGGTC AGATCTTCAA GCTGGGCACC AAGTACTCCG AGGCCATGGG CGCCCTGTTC ATGGATGAGG ACGGCACCGA GAAGCCCTTC ATCATGGGCT GCTACGGCGT CGGCGTGTCC CGCTGCATGG CCGCTGCCGT CGAGCAGAGC CACGACGACA TGGGCATCAT CTGGCCTGTC GGCATCGCCC CGGCTCACGT GGCGGTCATT CCGCTGTCCA CGAAGCCTGA CGAGGTTACG GAAGCCGCCG AGGACGTCGC CGCCAAGCTG GCTGCCGCCG GTCTGGAGGT TTGCATCGAC GACCGCGACG AACGTGCCGG TGTGAAGTTC GCCGACAACG ACCTCATTGG CTGGCCTGCC CAGGTCGTCA TCGGCAAGCG CGGCCTTGCT GCCGGCACCG TCGAAGTGAA GAACCGCAAG ACGGGCGAGA AGACCGACGT TGCGGTTGAT GATGTCGTGT CGTTCGTGGA GTCGCTGCTT TAA
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Protein sequence | MNKHLNRNIL RMSTMYVPTL KEDPSDADIP SAKLLTRAGM IRKEAAGLYS FLPLGLRVLR KIENIVREEM DSHGGEELLM PFVQSADLWR QSGRWGAYGE EMMTMRDRHD NEFCLGPTAE EVITDLVKNE LRSYKDLPKN LYHIQLKFRD ERRPRFGLLR SREFIMKDAY SFDKDQEGLE VNYQLMRDAY SRMCERMGME YRIVQADPGE IGGNGTEEFM TLAETGEAEL VYCDCGYAAD VEVGECHPNP VGYVGDTMEK IATPGLHTIE ELADFLGIEA DGTVKAFSGK DKEGAIWVLF VPGNYEVNED KAAHVVRGFE PLTDEEMKDA GLVKGSMGPV GLPEGVRICA DDSLRDVERW IVGANEEGYH LLGAKQGEDF TVDAWGDLCT VVAGDACPCC GKPLQAARGI EVGQIFKLGT KYSEAMGALF MDEDGTEKPF IMGCYGVGVS RCMAAAVEQS HDDMGIIWPV GIAPAHVAVI PLSTKPDEVT EAAEDVAAKL AAAGLEVCID DRDERAGVKF ADNDLIGWPA QVVIGKRGLA AGTVEVKNRK TGEKTDVAVD DVVSFVESLL
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