| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_23080 |
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| Symbol | |
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| ID | 8396197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2557833 |
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| End bp | 2559470 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644987056 |
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| Product | response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| Protein accession | YP_003144667 |
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| Protein GI | 257064995 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.865531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCCAAG GAACTGAATC GAAACAGGCA CGGGGCGTCT CTGCCGGCGC CCAGGAATCG
CGAGTGCCTT TTCTTGTTTT GGCGATCGCC GCCGGATTGT TCATGGCATG GTGGACGTCG
TTCCATGAGG TCGCATGCGG CTGCATGACC GTGCGCCACA CATTACCGAC GCCTTATGTA
TATGCAAGCT GCTACGCCTA CCCGGTCGGG TGCATCGCCG GCGCGGTGGT GCTTCGCAAT
TTGAACCGGG CGGGATTTCT CCACGCTTCG AAGAGGGCCC TTGTGGGGCT GCCGCTTATC
GGCACCGTGC TGAGCGCGCT CTTCTGCGCG GCCCTTGTGT TGGAATCCTA TGCGATTGCT
GCAGCCCTTC AAGCCGCTGC GAACACTGTG GCGGTCATCA TCTTCGCATA TCTCATGTCG
TCGCTTACCG CGCTGCCGAA GCATCAGGTG ATGCAGGTGC TGGGTGCATG CGGAATCGGG
TTTCTCGTTT TCGATAATGC TGTGCTGCCG ATGCTTATGC ACGTGCAGAA CGGCGTGTTC
CTGACTTCGT TGGCACAGGC TGCGCTGATT GCTTGTTGTG CAGGTTGCAT AGCGTATCTG
ATCCGTTGCG ACGAGTCGAA AAAGACAGTC AGGGCGATCG GTATCGAGCT GGCCGACGGC
GAACGTTTCG CATGGGCGTT GCAGCTGGGG GCAAAGGCGG AAGGCGGTGC CGACGGGGGA
TCGCCGGTGA AGCTGCGTGC CAGGGCGGAT GCTGACGCCG TGTCCGATGG GCAATCGTTT
GTAAGGGAGA GCTGCTTCAT TCCTTGGAGG CTTGCAGGGC ATGTTGTGGC GTATTGCCTG
ATTTTCGGCA TGATGCACGT GGAGGCAAGC AGCCTGCTGG GCGAGTACTA CGACCGCAGC
CCCGCTTACG CAACGGGAAC GTTGGCTGCG CTGGTGTTCT TCTGGGTTGT GTTCATGCAC
AGGGATTCCG AGAGTTCCAT CTGGGTGAAG GTCCGAAACG TCGTGTTTCC CCTCACCATG
GTGGGTTACC TGTTGCTGCC GCAACTCAAC ACCATCAATC CGTACGTGGC TGTGGCCGCC
ATCAACTGCG CCATGGTCTT CTACGATTTC ATTATCGCCT TGGCCATCCT GCGGATTTCA
CGGGAATCGT ACGTATCCGT CGCAGCGCTG GTCGCGCCTG CGATGCTGCT GAAGTCGATC
GGTTTTCTGG TCGGCAGCAT CATCGCTCAG GCCCAGCTCA TGGTGCTGCC CTATGATGCG
CTGCAGACGC CGTACGTGAG CGTGGCCATA TTCCTGCTGC TCATCGCGGC CACGTTCTGG
GTCGGCGACG ACCGTACCGC CAAGAAGATC TGGGGCATGC GGGTGGAGAT GACGCCGAAG
AAGTTCGCCC AGGAGGAGAT GCGCCGCAAG TGCGAGCACG CCGTCGTGAG CTATCAGCTC
ACGCCGCGCG AGTCCGAGGT TCTGGCGCTG CTTATGGAGG GCAAACGCCC CAAAGCCATC
AGCGACGAGC TTGTCATCAG CATCAACACC GTGCGTCTGC ACGTGAAGGG CATCTACGCG
AAGATGGGCG TGCATTCCCG CGAGGAGCTG GAGGCCCTAA TCGGGGGAAT TTCCGCCAAC
GAAGGCGCGA AGAACTGA
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| Protein sequence | MSQGTESKQA RGVSAGAQES RVPFLVLAIA AGLFMAWWTS FHEVACGCMT VRHTLPTPYV
YASCYAYPVG CIAGAVVLRN LNRAGFLHAS KRALVGLPLI GTVLSALFCA ALVLESYAIA
AALQAAANTV AVIIFAYLMS SLTALPKHQV MQVLGACGIG FLVFDNAVLP MLMHVQNGVF
LTSLAQAALI ACCAGCIAYL IRCDESKKTV RAIGIELADG ERFAWALQLG AKAEGGADGG
SPVKLRARAD ADAVSDGQSF VRESCFIPWR LAGHVVAYCL IFGMMHVEAS SLLGEYYDRS
PAYATGTLAA LVFFWVVFMH RDSESSIWVK VRNVVFPLTM VGYLLLPQLN TINPYVAVAA
INCAMVFYDF IIALAILRIS RESYVSVAAL VAPAMLLKSI GFLVGSIIAQ AQLMVLPYDA
LQTPYVSVAI FLLLIAATFW VGDDRTAKKI WGMRVEMTPK KFAQEEMRRK CEHAVVSYQL
TPRESEVLAL LMEGKRPKAI SDELVISINT VRLHVKGIYA KMGVHSREEL EALIGGISAN
EGAKN
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