Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_22660 |
Symbol | |
ID | 8396155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2510061 |
End bp | 2510705 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644987014 |
Product | Zn-dependent hydrolase, glyoxylase |
Protein accession | YP_003144625 |
Protein GI | 257064953 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.662338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTTG AAGTGCATCC CCTGATCGCG CGGGACGTGT TCGCCACGTA CGGGTACTTC GTCATAGATT CGGACACCGG CTGCGGCGTG CTGGTCGACC CTGGCGCCCA GCCGCAGCGC TTTCTGAAAA CGGTGCAGAC CCACGGGTGG AACATCCGAG CCATCCTCCT TACCCACGGG CACTTCGACC ACACCGGTGC TGTCAACGCG CTGCGGACAT CCTGGGAAAT CCCCGTGTAC GCGCACGCCT CGTCGGATGC CTATCTGCTC GATGCCGTCC TCAACCTTTC GGCGGGGTAC GGCCGCGATG TGGTTGTCGA AGGCGCGCTC CGTTTCGACG ACAGAGACGT CATAGAGGTC GCCCCCGGTT CGCAAGCCAT GCTCCACGTA CTGCATACGC CTGGGCATAC GGACGATTCC TGCGTGCTGT ATTGCCCGCA GGCGGGCATT GCCCTGGTCG GCGACACCGT CTACGAAGGA GGACCCGGGC TGACGGTGTT TCCCACCGGT AACGCGCAGA TTTTGGAGAA GTCCCTGCGC TCCAAGGTGC TGACACTGCC GGACGACACG CAGCTGCTTT CCGGTCATTC GCAACCTATG ACAGTCGCGG ACCTTCGCGC ATGCCTGGAT CGAAGCCCCA GGTAA
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Protein sequence | MTVEVHPLIA RDVFATYGYF VIDSDTGCGV LVDPGAQPQR FLKTVQTHGW NIRAILLTHG HFDHTGAVNA LRTSWEIPVY AHASSDAYLL DAVLNLSAGY GRDVVVEGAL RFDDRDVIEV APGSQAMLHV LHTPGHTDDS CVLYCPQAGI ALVGDTVYEG GPGLTVFPTG NAQILEKSLR SKVLTLPDDT QLLSGHSQPM TVADLRACLD RSPR
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