| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_22300 |
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| Symbol | |
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| ID | 8396119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 2471299 |
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| End bp | 2473107 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644986978 |
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| Product | beta-galactosidase/beta-glucuronidase |
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| Protein accession | YP_003144589 |
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| Protein GI | 257064917 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0671399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.394797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGATA TCCAACGAGT GCTTAAAGCG AAACCCAAAC CCCACGAACG AGCCGAGGCC
GTGCGCCTGG ACACGCCGTG GACCGCAGAG CTTGCCGAAG GCACGCCGCT GTGCGAGCAC
CCTCGCCCGC AGTTCGCCCG CAGCGGCATC GACATCCTCA ACGGATGGTG GGACGTGGCC
TTCGGGCCCA AGCCGGAAGG TTCGCCCAGC ATCGACGACC ATCCCACCTT CGATGGGAAA
ATCCTGGTCC CCTTCTCCCC CGAGGCCCCC GCGTCAGGCG TCGGGCGGCG GCTCGAACCC
AACGAGACCC TGTGGTATCG CCGCACCTTC GACATCCCCG AGTTGGCCGG CAAGCGCCTG
CTGCTGCATT TCGAAGCCGT GGACCACGCC TGCACCTGCT GGTGCAACGG CAAGCAGGTG
GGCACGCATG AGGGCGGCTA CCTCCCCTTC GCCTTCGACA TAACCGATGC GCTGGTGGGC
GTGTCGGCTG AAATCGTCCT GTGCGTGACC GACCCCAGCG ACACGGGCAC CCAGCCCCGC
GGCAAGCAGA AACTGCAGGC GGGCGACATC TGGTACACGG CACAAAGCGG CATCTGGCAG
ACGGTCTGGC TGGAAGTGGT GCCTGCGGCC CATATCGAAA ACGTGCGGAT GGATGCGAAC
CCCGACGACG GCGCGCTGCA TGTGCGGGCG CGCACCGCAG GCCCGGACGG GGATTTCTAC
GTGTGGCTGC TGGACGGTGG CCGCCTGGTG GCTGAAGCCT GCGTCCAGAC GGAAAACGGC
GTCGCCGCCA TCGACCTGCC GGTGGAACGA CCCTGCCTGT GGTCGCCCGA CGACCCGTAT
CTCTACAGCG TCCAGCTCGC TTTCGGCGAC GACTCGGTCC GCAGCTACTG CGCCTTCCGC
ACGGTAGGCG TCGAGCGGGA CGCGGCCGGC ACGCCCCGGT TCTGCCTCAA CCACAATCCG
GTGTTCCTGC GCGGCGTGCT TGACCAGGGC TACTGGTCGG ACGGCCTGCT TACGGCCCCG
TCCGATGCTG CCCTGATCCA CGACATCGAG TCCGCCAGGC GCCTGGGGTT CAACATGATT
CGCAAGCACA TCAAGGTGGA AAGCGACCGC TGGTATTGGC ACTGCGACCG GCTGGGCATG
CTGGTCTGGC AGGACATGGT AAACGGCGGA ACGGACTACA GCTCCTGGCA CACAAGCTAC
AAGCCCACGT TGTTCAGCTG GTCGTGGACG CGTTTTCCCG ACGACACGCC GAAGCACCGC
AGCGCCCTGT CCGCAGGCGA CGCCGCCATG CGAAAAGCTT GGACTGACGC CTGCATGGGC
ACGGTTCGGC ATCTGGCCAA TCACCCGAGC ATCGTCACCT GGGTGCTCTT CAACGAGGGT
TGGGGGCAGT TCGATGCGGC GGCCGCCACA AAGGCCGTGC GCGCCGAAGA CCCCACACGC
CCCATCGACG CCACCAGCGG CTGGTACGAC CAGCGGTGCG GCGACTATTT CAGCATCCAC
AACTACTTCC GCCCGCTGGA GGTGCTGCGC GACCCAGCCG CCACGCCGCG GGCCTTCGTC
CTGTCCGAAT TCGGCGGGCT GGCCTACCAT GTAGACGGCC ACAGCGCGCT TGAGCTGGAC
TACGGCTACG AGACCTATGC AAACCTGGAC GAGCTGAAGA CGGCCGTCCG CGCACAGCTT
GCCGCCGCCG AGGCGCTTGA ATCAAAAGGG TGCTGCGGAT ACGTGTACAC CCAGCTCAGC
GATGTGGAAG AGGAAACGAA CGGTCTGCTG ACCTTCGACC GGAAGATAAA CAAGCTCGTA
AAGGAATGA
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| Protein sequence | MLDIQRVLKA KPKPHERAEA VRLDTPWTAE LAEGTPLCEH PRPQFARSGI DILNGWWDVA
FGPKPEGSPS IDDHPTFDGK ILVPFSPEAP ASGVGRRLEP NETLWYRRTF DIPELAGKRL
LLHFEAVDHA CTCWCNGKQV GTHEGGYLPF AFDITDALVG VSAEIVLCVT DPSDTGTQPR
GKQKLQAGDI WYTAQSGIWQ TVWLEVVPAA HIENVRMDAN PDDGALHVRA RTAGPDGDFY
VWLLDGGRLV AEACVQTENG VAAIDLPVER PCLWSPDDPY LYSVQLAFGD DSVRSYCAFR
TVGVERDAAG TPRFCLNHNP VFLRGVLDQG YWSDGLLTAP SDAALIHDIE SARRLGFNMI
RKHIKVESDR WYWHCDRLGM LVWQDMVNGG TDYSSWHTSY KPTLFSWSWT RFPDDTPKHR
SALSAGDAAM RKAWTDACMG TVRHLANHPS IVTWVLFNEG WGQFDAAAAT KAVRAEDPTR
PIDATSGWYD QRCGDYFSIH NYFRPLEVLR DPAATPRAFV LSEFGGLAYH VDGHSALELD
YGYETYANLD ELKTAVRAQL AAAEALESKG CCGYVYTQLS DVEEETNGLL TFDRKINKLV
KE
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