Gene Shel_21660 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_21660 
Symbol 
ID8396055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2400148 
End bp2401350 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content60% 
IMG OID644986914 
Productprotein kinase family protein 
Protein accessionYP_003144525 
Protein GI257064853 
COG category[K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0515] Serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.285343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATC AGAAGATATA TGCGGCGCAA GAACATGACG ACGGACGATA TCGTGTCGAG 
CAGGTGCTGT CAGCCAATGC CGCCGAAACT GTCCAGGCGG TTTTGCCTGT GCGTAGGGAC
GGGTCGACCG GCCCGCTGCG CATTCGGAAA ATCATGGCGG ATGTCCAAGG GTTCGGCCGT
GCGTACGATG TTCTGTACGA GGCGCAGCAG CGGGGCCTTC GCTACAAGTA CGTCCCCCTC
ATCTACGAGG TAGAGCATGA ACCGGGTACA ACGGTCGTCG TCATGGAGTT TGTCGAAGGT
CGGACCCTTG AGCAGTGCGT CCTTTCGGGC ACATATGACC GCGAGCGGTT GCAGACGGTG
TTTTTGCGGC TGGCGGACGC CTTGTCGGAA TTGCACGAAG GGTTCGATCC TCCCATCATC
CATCGGGACC TGCAGCCTGG AAACATCGTC ATAACCGCTA AAGACATGCC CGTTCTGGTC
GATTTCGACG TGGCGCGGGA ATACGCGTCG GGGGCCGAAC GGGATACGAA CCCCTTCGGC
ATGCGAGGCT ATGCAGCCCC CGAGCAGTTC GGCTATGCCC AATCGAGCGT GGCCAGCGAC
ATCTATGCTT TGGGTATGGT ATACGCGTTT TGCCTGTTGG GGCGCATGCC GACCCAGTCG
GACCTGGCCG ATGGGTTCGC GCAGGCCCAA ACGACCCCTG CCATGCGCAG CGTTTTGGCG
AAGGCCACCG CGTTCGATCC TGCGAAGCGG TTCTCTTCGG CAGCGGAGCT TAAGCAGGCC
GTGTCCCGCG CATTGGGCGG CTCCGAGCCT GCCGTGCCGT TGAAGGCTGA GTCGGCTTCG
GCCGCCGAAC CAGAGATGAA GCCCCGATCG CTGTTCGTGT CGTCGCTCGC CATGATATGG
AATGCGCTGC TCGCGCTGTG CGTGCTTGCC ATGTCCTGGA TTCTGTGGCT CTGCATCATA
GGTGATGACG ATCCCAGCGG GTGGCCCTTT TGGTTCAGGG TGGTCGTCTA CGGTTTTTTG
GCTGGCGGCT GGATGCTGTG CGCCTTCTGG GCGCTTGTCG ACAAGCATTT CTTGAAGAAG
CGCTTCCCAA AGCTTCGCAA GCTGGGGTTC TTCCTGAACC TTTTGCTGAC GGGACTGGTT
GCCCTTGTTC TGTTTGTCGT CGTCATCGCC ATTGCTGCAC TGACGGGAGT CGTGCAGCCG
TAG
 
Protein sequence
MDNQKIYAAQ EHDDGRYRVE QVLSANAAET VQAVLPVRRD GSTGPLRIRK IMADVQGFGR 
AYDVLYEAQQ RGLRYKYVPL IYEVEHEPGT TVVVMEFVEG RTLEQCVLSG TYDRERLQTV
FLRLADALSE LHEGFDPPII HRDLQPGNIV ITAKDMPVLV DFDVAREYAS GAERDTNPFG
MRGYAAPEQF GYAQSSVASD IYALGMVYAF CLLGRMPTQS DLADGFAQAQ TTPAMRSVLA
KATAFDPAKR FSSAAELKQA VSRALGGSEP AVPLKAESAS AAEPEMKPRS LFVSSLAMIW
NALLALCVLA MSWILWLCII GDDDPSGWPF WFRVVVYGFL AGGWMLCAFW ALVDKHFLKK
RFPKLRKLGF FLNLLLTGLV ALVLFVVVIA IAALTGVVQP