| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_21030 |
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| Symbol | |
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| ID | 8395992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 2334057 |
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| End bp | 2335607 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644986852 |
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| Product | RHS repeat protein |
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| Protein accession | YP_003144463 |
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| Protein GI | 257064791 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCCAGTA CTGGTCTCCG GTCGAAGTTG CGTACGGCCC TCGCCGCCGC TCTGGCACTT
TCGGCCGTGG CGGCGGTGGT CGCCGTCGTC TTGGCGGGAT GGGAGGCTTC GGGTTCCGAC
TACGCCCTGA CCAGCGAGGA GTTTCCCGAT AACCGGGTGC TGGCCGTCAT GGAGTCTTTC
GACACCGACG GTGACGGCGG GCTTTCGCGT GAAGAGGCCG CCGCCGTGAC CGAGGTGTCC
GTCGAAGGGA CGGAGGACCT GGCGTTTCTT GCTCTGCTTC CCAATGTGAC CACGCTTGCC
GTGTCGGGCA CCAACATCGA GTTCTTGAAT CTGAGCGGCG CGAACAACCT TGAGCGCCTG
ACGCTGGATT GTCCGGCGCT TACGGAAGTG ACCTGGGGAA AGACCGGTCA GCTGGCATAT
GTGGACGTGT CGGGCACGAA ACTTGCAGAA CTGGACGCTG CCGTGCTTCA GGCGGCGGCG
TATCTGGATG TGACCGGGTG CGAGAATCTT GCGGAGCTGA ACCTTTCCGC CAACAGCGCT
TTGGAGACGC TGCGGGCGAT GGACACGGCT TTGACCGAAG TCGATGTGAG CGGGGCCGCG
GGGCTTTCCG CAATCGAAGT TGACGACGAC GTAGCGGTGG TAGGGCTTGA GGCCACGCCG
ATTCACGAGC AGTGGGTGCC TGTCCACGTG ACGAAGGTCG TGTCGTCTTC TGGTGGAACC
TCTACATACG AGTACTCGTT GAGTTTGGAC GAGGCTGGGG TCGCCACGGG GTATGCGGAA
AGCACCGTGG GCGTGGACGA CACTTCTGAA CAGGCAGTTT ACGAGTTCAA CTACGATGAA
TCCGGCAACA TCATAGGCAT TTGGGATGTC GAAGCCGAAT CTATGGACGT GGAGTTCGTC
TACGACGATG CGGGCAACGT CATTCGCCGC ACGGGTGTGC CCACGGAATA TTCCTACACC
TACGACGATC AGGGGCGGTT GGAATCCTTC GTCTCGACAG GCACCGTCCT CACCCTCGCC
TACGACGAAG CGGGCCGGCT TGCGTCCTAC ACCAGCAGTT TCGGCGGACG GGCGGTTGAA
TACACCTACG CCTACGACGC GGAGGGCAGG GTGACAGGCG TGAGCGATTC GTCTGACCGG
CCGATGGAAT ATACCGTGGA CTACGACGAT AACGGCGCGT GCTCGTCCAT CCTGATCGAA
GGTGCCGTTG GAAGCGAAAC CTACCGGTTC GTTCGCGATG AGGACGGCCG CCTGACGAAC
ATGACGATGG AGACCACGGG CGACTTCAAA CAGCTCGGCA ATGTGGACGG CGTTCAATTC
GAATACAACG CCGCAGGTCA GATCAGCGGA TTTACCTACG AGAACTGGAA CACCGAGTAC
ACCTTCGCCG TGGAGTACGA GCGGTTCTTC CTGGGTCAGG GCGAATGCGT GCAGGCGACG
CTGGGCAGCT TCGCCAATCC GCTGTGGTGG ACGTCGGAGG GTCTGACCTG GATGAACCCC
GAACGATGCG TCCGCACCGA GGGCGTCATT TCTGCGAGTA TGGCACGCTA G
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| Protein sequence | MPSTGLRSKL RTALAAALAL SAVAAVVAVV LAGWEASGSD YALTSEEFPD NRVLAVMESF
DTDGDGGLSR EEAAAVTEVS VEGTEDLAFL ALLPNVTTLA VSGTNIEFLN LSGANNLERL
TLDCPALTEV TWGKTGQLAY VDVSGTKLAE LDAAVLQAAA YLDVTGCENL AELNLSANSA
LETLRAMDTA LTEVDVSGAA GLSAIEVDDD VAVVGLEATP IHEQWVPVHV TKVVSSSGGT
STYEYSLSLD EAGVATGYAE STVGVDDTSE QAVYEFNYDE SGNIIGIWDV EAESMDVEFV
YDDAGNVIRR TGVPTEYSYT YDDQGRLESF VSTGTVLTLA YDEAGRLASY TSSFGGRAVE
YTYAYDAEGR VTGVSDSSDR PMEYTVDYDD NGACSSILIE GAVGSETYRF VRDEDGRLTN
MTMETTGDFK QLGNVDGVQF EYNAAGQISG FTYENWNTEY TFAVEYERFF LGQGECVQAT
LGSFANPLWW TSEGLTWMNP ERCVRTEGVI SASMAR
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