Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_20890 |
Symbol | |
ID | 8395978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 2321008 |
End bp | 2321724 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644986838 |
Product | predicted membrane protein |
Protein accession | YP_003144449 |
Protein GI | 257064777 |
COG category | [S] Function unknown |
COG ID | [COG2717] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTCC TGTTCACGCT TATCGCAGTC GTCATTGCGG CGATCGCCCT GCGCAAACCC ATCGTCAAGG CCCCGTGGGT CTTCTACGCC CTGGCTGTTC TGCTCGACGT GGTGCTTCTC ATGTCGCAGA CCCAGGTTCT GCCCCTGCAG GCACGACTTG CCATCGCCTA CCTCATGCAG CGCGGCGGCC TGGGCGTGGC CACGTTCATC CTGGTCATGT ATATCGGCGT ACTGCCCCGC GCAAGCTGGG CGTCCCGTTG GCTTCGCCCT ATCCGCGCCG AACTCTCGAT CATCGCCTGC ATCCTCATCG CGGGGCACAT GTGCGTTTTC CTGCCCGTCT ACGCCATGCC GTTCTTCACG GGCAACCTGT CCCAGATAAA CGTCATCGGC GCCTTCGCCA TGGCCTTGTG CCTGCTGGTG CTTGTGCTGG TGCTGGGCAT CACGTCCTTC AGGTTCGTCA AGCGCCGCAT GAAGGCCCGC ACCTGGCGCA AGATCCAGCG CTTCGCCTAC CTGTTCTACG CGCTCGTGTT CGCCCATGTG ACCCTCATGC TTGCGCCTGC AGCTGCGGCC GGAAATACCG GAACGGCCGC CACCATGGGC GTGTACTGCG TCGTGTTCGT GGTCTACACC GCGCTGCGCA TCCACCGCGC CCAGGTGGAC CGCCGCGAGA AAATCGACCT GGAACAGACC ATCATCGAGC AAGGCTTCGT GGAATAG
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Protein sequence | MTFLFTLIAV VIAAIALRKP IVKAPWVFYA LAVLLDVVLL MSQTQVLPLQ ARLAIAYLMQ RGGLGVATFI LVMYIGVLPR ASWASRWLRP IRAELSIIAC ILIAGHMCVF LPVYAMPFFT GNLSQINVIG AFAMALCLLV LVLVLGITSF RFVKRRMKAR TWRKIQRFAY LFYALVFAHV TLMLAPAAAA GNTGTAATMG VYCVVFVVYT ALRIHRAQVD RREKIDLEQT IIEQGFVE
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