Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_20030 |
Symbol | |
ID | 8395892 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2240377 |
End bp | 2240811 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644986754 |
Product | Mn-dependent transcriptional regulator |
Protein accession | YP_003144366 |
Protein GI | 257064694 |
COG category | [K] Transcription |
COG ID | [COG1321] Mn-dependent transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.487475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGAAC TTCAAACTGA AACTATGCTC GAATCTCGTC AGGCCGAGGG CCTGAGCCAT TCTCTTGAAG ATTACCTTGA AGCCATTGTC GACTTGGCTG GTCCTGAGAA CAATCCCATC CGCGCGGTTG ATCTGGCTAA GAAGCTGGAT GTTTCCAAGG CGTCCGTGTC GAAGGCCATC TCCAACCTGA AGGACAAGGG CTTTGCCGAC CAGCCGTACT ATGGCGATAT CACGCTGACC GAAGAGGGGT TGGCTTACGG CAGGGCCGTT TGGCACAAGC ACAAGCTGTT GTTCCGTTTC CTCAACGAGA CAATCGGCAT CGACCCCGAG ACGGCAAACT ACGAGGCCTG TCAGATGGAA CACACCATCA GCAGCGACTC ATTCCAAAAA TGGGAGGCCT TCCTTGCTAC CGTCGGCATA GGCGAAGGCG CGTAA
|
Protein sequence | MTELQTETML ESRQAEGLSH SLEDYLEAIV DLAGPENNPI RAVDLAKKLD VSKASVSKAI SNLKDKGFAD QPYYGDITLT EEGLAYGRAV WHKHKLLFRF LNETIGIDPE TANYEACQME HTISSDSFQK WEAFLATVGI GEGA
|
| |