Gene Shel_20030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_20030 
Symbol 
ID8395892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2240377 
End bp2240811 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content54% 
IMG OID644986754 
ProductMn-dependent transcriptional regulator 
Protein accessionYP_003144366 
Protein GI257064694 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.487475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC TTCAAACTGA AACTATGCTC GAATCTCGTC AGGCCGAGGG CCTGAGCCAT 
TCTCTTGAAG ATTACCTTGA AGCCATTGTC GACTTGGCTG GTCCTGAGAA CAATCCCATC
CGCGCGGTTG ATCTGGCTAA GAAGCTGGAT GTTTCCAAGG CGTCCGTGTC GAAGGCCATC
TCCAACCTGA AGGACAAGGG CTTTGCCGAC CAGCCGTACT ATGGCGATAT CACGCTGACC
GAAGAGGGGT TGGCTTACGG CAGGGCCGTT TGGCACAAGC ACAAGCTGTT GTTCCGTTTC
CTCAACGAGA CAATCGGCAT CGACCCCGAG ACGGCAAACT ACGAGGCCTG TCAGATGGAA
CACACCATCA GCAGCGACTC ATTCCAAAAA TGGGAGGCCT TCCTTGCTAC CGTCGGCATA
GGCGAAGGCG CGTAA
 
Protein sequence
MTELQTETML ESRQAEGLSH SLEDYLEAIV DLAGPENNPI RAVDLAKKLD VSKASVSKAI 
SNLKDKGFAD QPYYGDITLT EEGLAYGRAV WHKHKLLFRF LNETIGIDPE TANYEACQME
HTISSDSFQK WEAFLATVGI GEGA