Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_19420 |
Symbol | |
ID | 8395831 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2176173 |
End bp | 2176643 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644986693 |
Product | hypothetical protein |
Protein accession | YP_003144307 |
Protein GI | 257064635 |
COG category | [S] Function unknown |
COG ID | [COG1576] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000114035 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATTG AGATCATCGC CGTCGGCAAG CTGAAGGAGA AGTACTGGCG CGACGCTTGC GACGAGTATC TGAAGCGATT GAAGGGCTAT GCGAAGGTGA CCGTCCATGA GGTGCCTGAC CTCGACCCGA AAAAATGCGG CGGCGACGAG AACGCCCTGA AGCAGGAGGG CAAATCCATT CTGGAGGCAC TGCCCGAACG CTCTCATGTC ATCTTGCTGG ACATCGACGG CAAGGAATTC TCGAGCGATG GCATAGCTGC GCGCATCGAC GCCATCAAGT TGGGTGGCGT GAGCGACATC ACGTTCGTGG TCGGCGGATC GAACGGCGTA AGCGACAGCG TGAAATCCGC AGCCAACGAG CGCCTGTCCT TCGGAAGGAT CACGCTCCCT CATAATCTGG CCAGGGTCGT GCTGCTTGAG CAGATATACC GCGCCTTCAA AATCAGCCGC GGCGAGCCTT ACCACAAATA G
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Protein sequence | MKIEIIAVGK LKEKYWRDAC DEYLKRLKGY AKVTVHEVPD LDPKKCGGDE NALKQEGKSI LEALPERSHV ILLDIDGKEF SSDGIAARID AIKLGGVSDI TFVVGGSNGV SDSVKSAANE RLSFGRITLP HNLARVVLLE QIYRAFKISR GEPYHK
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