Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_18680 |
Symbol | |
ID | 8395757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2096044 |
End bp | 2097501 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644986619 |
Product | CotH protein |
Protein accession | YP_003144233 |
Protein GI | 257064561 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5337] Spore coat assembly protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.237965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.166703 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGAAT CAACCCTGAA GCTATCCAGT CGTCAAGCCT TTCTTTTGGC GACAGCGTTC CTGGTTGTTT GCCTGCTGGT TTTCACCGGC TGTCACTCCG CCGATAAAGA CGAGGACGGC GGGGCAGAGG CCTCCGCCTA CGCGAGCCTC ATATTCGATG GCACCCGCGT CCATACCGTC GACATCGAAA TGACGGAAGA GGACAGGACC AACCAGCCTT CGAATCCGAA GGAGAAGACC AAATACAAGG TGACCGCGGT GATCGATGGG GAAGAAGTCG AAGACGTCGC CTTCAGCACG AAGGGCAATT CCAGCCTGTT CTTCGTGGCG GATGCCGGCA AGGACAAATT CAGTTACGGG ATCGATTTCG GAAAGTACGT GGACGGTCAG ACCTATCACG GCTTGGACAA GCTGAACCTT CAGAACAACT TCACGGACGG GTCTGCGATG AAGGAGCACA TGGCATACTG GCTGTTCGAC AGAATGGGCG TGGATGCGCC GTTGACGTCA TACGTGTGGC TGACGGTAAA CGGTGAGGTC CAGGGGCTTT ACACCGCTGT CGAGGGAGTC GAAGAGAGCT TCCTCGAGAG AACGCAAGAC GGGGAAGGGG CGCTTTACAA ACCCGAAGAC GGCGACATGG CCCTGACCGA TGAGGAAATG AAGCGGATCC AAAACGGAGA AAGCGCGGCC CATAACAACG GGGGCGGCGC GGATCTGGCA TACAAGGACG ACAACGAAGA GAGCTACCCC GACATCTTTG AGAATGCGGA AACCCCCGAC GACGCGGAAA CGCGTGAGCG GATAATAATG GCGCTGAAGG CTCTCTCCGA GGGAGAAGAG TTGGAGCAAC ACCTGAATAC GGAAGAGATC ATAAGATACT TCGCAGTCCA TAACTTTCTG GTGTCCTATG ACAGCTATAC GGGACCGATG CTCCACAACT ATCTGCTGTA TGAAAAAGAC GGCAGGCTCG CTCTGTTGCC ATGGGACTAT GACATAGCGT TCGGCAGCTT CCCGGCGGAT GCGCAGGTGG GCCAGAAAAT AGACAGCGGC GCCGTCGTCA ACGCGGGCAT CGATTCCCCG TTGGGAATCG TTCCCGATGA AGAACGCCCG ATGTGGAACT GGATACTGTC CGACGAACGG TATCTCGCGG AGTATCATGA CGCGCTTTCG GACGTGACGG ATATCATTGA TTCCGGAGAT TTCAAAGCGG AATCGGAAAG GGTCCACGCG CTCATAGCTC CCTATATCGA AGAGGATCCG AAAGCATTCT TCTCGCCGGA AAAACACGAT ACGGCCTATC AGACGCTCCT GATGTTCACG GAGCTGAGGG CGGAAAGCAT AACGAAGCAA CTGGATGGCA AGCTCGCGAC CAGGTCGGAT TCGCAGGACG ATGCGGACAA GGTGGATGCT TCCGATATGT CCATCGAGGA CATGGGGTCC GACCGGGATC TGCAATGA
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Protein sequence | MKESTLKLSS RQAFLLATAF LVVCLLVFTG CHSADKDEDG GAEASAYASL IFDGTRVHTV DIEMTEEDRT NQPSNPKEKT KYKVTAVIDG EEVEDVAFST KGNSSLFFVA DAGKDKFSYG IDFGKYVDGQ TYHGLDKLNL QNNFTDGSAM KEHMAYWLFD RMGVDAPLTS YVWLTVNGEV QGLYTAVEGV EESFLERTQD GEGALYKPED GDMALTDEEM KRIQNGESAA HNNGGGADLA YKDDNEESYP DIFENAETPD DAETRERIIM ALKALSEGEE LEQHLNTEEI IRYFAVHNFL VSYDSYTGPM LHNYLLYEKD GRLALLPWDY DIAFGSFPAD AQVGQKIDSG AVVNAGIDSP LGIVPDEERP MWNWILSDER YLAEYHDALS DVTDIIDSGD FKAESERVHA LIAPYIEEDP KAFFSPEKHD TAYQTLLMFT ELRAESITKQ LDGKLATRSD SQDDADKVDA SDMSIEDMGS DRDLQ
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