Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_18430 |
Symbol | |
ID | 8395733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 2069852 |
End bp | 2070490 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644986596 |
Product | transcriptional regulator, tetR family |
Protein accession | YP_003144210 |
Protein GI | 257064538 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.120419 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGATT ACATACGGGC GCGCTCTCCT GAACACAAGC AAGAGCGCAT GGCGGCGATC ATGCAGGCGG CCGACGAGCT GTTTGCGGGT AGGCCCTATC ATCAGATAAC GATGGGCACG ATTGCCGAGC ATCTGGGATG GTCGCGTTCG AACCTCTATA AATACGCAGC CACGCAGGAG GAGATCTTCC TGGAGCTGCA CGCGCAGAAG AACCGCGCCT GGCTCGAAGA TCTTTCCGCC AACCTTGAGG ATGCGCCGCT CAGCTCGGCC GAATTCGCCC GCATATGGGC CGAAACCACG GGGCGGCATG CAGCGTTCCT GCGCTATCAG GGTATTCTCG TGTCCATTAT CGAAAGCAAC GTCACATTGG AGCGGCTGAC CGCTTTCAAG CGCGGGTTCA CGGACATGGT GAAGCCTGTG GCTGCCGTCC TGTCGCGCCA GTGCGGTATC GAAGAGCCTG CAGCACTCGA CCTGTATCTG CGCCTGCTTT ACCAAGCGCC AGGGCTTTGG GACCACTTCC ATTTCTCGGA AACGACCAAG CAGGCCATGC GCGCGGCCGG CATCCCCGAG ACGCAAGGCA CGTTCGAAGC TGCCTACGCC GACTTCGTGC ACCTGTGCAT CGAAGGCGCT GCTCGCTAG
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Protein sequence | MGDYIRARSP EHKQERMAAI MQAADELFAG RPYHQITMGT IAEHLGWSRS NLYKYAATQE EIFLELHAQK NRAWLEDLSA NLEDAPLSSA EFARIWAETT GRHAAFLRYQ GILVSIIESN VTLERLTAFK RGFTDMVKPV AAVLSRQCGI EEPAALDLYL RLLYQAPGLW DHFHFSETTK QAMRAAGIPE TQGTFEAAYA DFVHLCIEGA AR
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