Gene Shel_18390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_18390 
Symbol 
ID8395729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp2066659 
End bp2067546 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content63% 
IMG OID644986592 
Productnitroreductase 
Protein accessionYP_003144206 
Protein GI257064534 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.281647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGTCG AGTCGAAAAC GCTGTTCAAG GTGGACGTGG ACCGCTGCAT CCGCTGCGGG 
CGGTGCGTGA ACGTCTGCTC GGGCATGGTG CTCGAGCGAG GTCGGGACCA AACGCCGCAC
ATGCTGCCCT TCGAACGCTT CGGCTGGAAA GGCTGTTGGC GGTGCGAGCA TTGCCTTGCC
GTGTGCCCCG TGGGGGCCAT CTCGATATTC GGGAAGGACC CGTCCGACTC GTCGTCGCCC
GCCCCGCCTG AGGCCGCCGA TCATCTGGAA CGGCTGGTGG CCAACCGCAG AACCTGCAGG
CGCTACCTGG ACAAAGACGT GGACCCGACC ATCGTCGACA GCATTCTGGA CGCCATGCAG
AACGTGCCCG CCGGCGGAAA CGCCCAAAAC ACCGAATACA CCGTGATCGA TTCGAAAGAA
CGGATGGACC GCATTCGAGA AAGCGCCTAT GCCGCCATGG AGCAGGCGGC GGCAGAAGGC
CGCTATACTT CGAGCTTCGA CGCGTTCTAT TACCGCAAGA TGAAACAGTC GGAGGCAACG
GTGCGCAAAG GCGACCTGCT TTTCTGCGGA GCTCCGCACC TGTTCGTAGC GCACGCGAAG
GCCACGGGCC GCTGGGCCGA CGATTACGCC GTCAACTGCA ATCTGGCCAC AGCCTATTTC
GAGCTTTTGG CCAACGCCCA CGGCTTGGGC ACCGCCATCA TGAGCTATCC GTCCGACGTG
CTCAACGAGC TTGCGCCCGA AGCTCGCGCC ATGCTTGGCA TTCCCGCCGA CCACTACATG
AAGCCTGTCG TCGGGTTCGG TTACCCCGAG ATCCCCTATG CCCGCGGCGT GCGGAAAAAC
CGCCGCAAAG TGCATCGGTG GTCGAAGTAC GCCGAATCGG GCATCTAA
 
Protein sequence
MGVESKTLFK VDVDRCIRCG RCVNVCSGMV LERGRDQTPH MLPFERFGWK GCWRCEHCLA 
VCPVGAISIF GKDPSDSSSP APPEAADHLE RLVANRRTCR RYLDKDVDPT IVDSILDAMQ
NVPAGGNAQN TEYTVIDSKE RMDRIRESAY AAMEQAAAEG RYTSSFDAFY YRKMKQSEAT
VRKGDLLFCG APHLFVAHAK ATGRWADDYA VNCNLATAYF ELLANAHGLG TAIMSYPSDV
LNELAPEARA MLGIPADHYM KPVVGFGYPE IPYARGVRKN RRKVHRWSKY AESGI