Gene Shel_17270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_17270 
Symbol 
ID8395617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1951028 
End bp1951951 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content61% 
IMG OID644986481 
Productpredicted membrane protein 
Protein accessionYP_003144095 
Protein GI257064423 
COG category[S] Function unknown 
COG ID[COG3326] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.692872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGTGT TGATGATTGT TGCTGCGGTG CTGGCTGTCG TGAACGTGGC AGCGTTTTCC 
GCATACGGCA TCGACAAACG CCGCGCCCGC CTGGGCCGAT GGCGCATTCC CGAACGCACG
TTGCTGTTGC TGGCGGCACT GGGCGGAGCG TTGGGAGCCC GACTGGGCAT GGGCGTGTTC
CACCACAAGA CCCAGAAACG CCGCTTCCGC ATCCTGGTGC CGTTGTTCCT GGTCATCCAG
CTTCTGGCCT TCGGCTTCTA TGCGGCGCTG GTCATCTATA CGAGCGATTC CTACCAGCCT
GACAAAACGG CCGAAGCCGC CCTTGAATCC TCGGATACCG TGGCCGTGAC GCAGATTCGC
CAAGGATGGT ATTTCGACGG GCCCGGTACC GAAAGTGCCC TGGTGTTCTA CCCCGGCGGC
AAAGTGGAGG CTCAGGCCTA TGCGGAGCTG CTACATGCCC TGGCCGAGGG CGGCGTGGAC
TGCTTTCTTG TGGACATGCC CTTCAACCTG GCGTTTTTCG GAGTCGACAA GGCGGCGAGC
ATCCAAGACG CCTACGATTT CGACCAGTGG TACATGGGTG GCCATTCCCT GGGCGGTGTG
GCGGCGGCCT CATACGCCGC AAAGCACATG GACCAGTTGG ACGGCATCGT GCTTCTGGCC
TCGTATTCCG TCGACGACCT GAATGGCGAA GGGTTCTCGG CGCTTTCCAT ATACGGCAGC
GACGACGGCG TGCTGAACCG GTCCTCTTAC GATGAGAACT TGGCAAACCT GCCCGATGCC
GCCGTGCAGA CGGTCATCGA GGGCGGCAAC CACGCCCAGT TCGGCAACTA CGGACAGCAG
AAAAACGACG GCGACGCAGC CGTGTCCGCC GAAGAGCAGC AGCGCCAAAC CGTCGATGCG
ATACTTGAGT TCGTCGAATC CTAA
 
Protein sequence
MTVLMIVAAV LAVVNVAAFS AYGIDKRRAR LGRWRIPERT LLLLAALGGA LGARLGMGVF 
HHKTQKRRFR ILVPLFLVIQ LLAFGFYAAL VIYTSDSYQP DKTAEAALES SDTVAVTQIR
QGWYFDGPGT ESALVFYPGG KVEAQAYAEL LHALAEGGVD CFLVDMPFNL AFFGVDKAAS
IQDAYDFDQW YMGGHSLGGV AAASYAAKHM DQLDGIVLLA SYSVDDLNGE GFSALSIYGS
DDGVLNRSSY DENLANLPDA AVQTVIEGGN HAQFGNYGQQ KNDGDAAVSA EEQQRQTVDA
ILEFVES