Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_17270 |
Symbol | |
ID | 8395617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1951028 |
End bp | 1951951 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644986481 |
Product | predicted membrane protein |
Protein accession | YP_003144095 |
Protein GI | 257064423 |
COG category | [S] Function unknown |
COG ID | [COG3326] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.692872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGTGT TGATGATTGT TGCTGCGGTG CTGGCTGTCG TGAACGTGGC AGCGTTTTCC GCATACGGCA TCGACAAACG CCGCGCCCGC CTGGGCCGAT GGCGCATTCC CGAACGCACG TTGCTGTTGC TGGCGGCACT GGGCGGAGCG TTGGGAGCCC GACTGGGCAT GGGCGTGTTC CACCACAAGA CCCAGAAACG CCGCTTCCGC ATCCTGGTGC CGTTGTTCCT GGTCATCCAG CTTCTGGCCT TCGGCTTCTA TGCGGCGCTG GTCATCTATA CGAGCGATTC CTACCAGCCT GACAAAACGG CCGAAGCCGC CCTTGAATCC TCGGATACCG TGGCCGTGAC GCAGATTCGC CAAGGATGGT ATTTCGACGG GCCCGGTACC GAAAGTGCCC TGGTGTTCTA CCCCGGCGGC AAAGTGGAGG CTCAGGCCTA TGCGGAGCTG CTACATGCCC TGGCCGAGGG CGGCGTGGAC TGCTTTCTTG TGGACATGCC CTTCAACCTG GCGTTTTTCG GAGTCGACAA GGCGGCGAGC ATCCAAGACG CCTACGATTT CGACCAGTGG TACATGGGTG GCCATTCCCT GGGCGGTGTG GCGGCGGCCT CATACGCCGC AAAGCACATG GACCAGTTGG ACGGCATCGT GCTTCTGGCC TCGTATTCCG TCGACGACCT GAATGGCGAA GGGTTCTCGG CGCTTTCCAT ATACGGCAGC GACGACGGCG TGCTGAACCG GTCCTCTTAC GATGAGAACT TGGCAAACCT GCCCGATGCC GCCGTGCAGA CGGTCATCGA GGGCGGCAAC CACGCCCAGT TCGGCAACTA CGGACAGCAG AAAAACGACG GCGACGCAGC CGTGTCCGCC GAAGAGCAGC AGCGCCAAAC CGTCGATGCG ATACTTGAGT TCGTCGAATC CTAA
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Protein sequence | MTVLMIVAAV LAVVNVAAFS AYGIDKRRAR LGRWRIPERT LLLLAALGGA LGARLGMGVF HHKTQKRRFR ILVPLFLVIQ LLAFGFYAAL VIYTSDSYQP DKTAEAALES SDTVAVTQIR QGWYFDGPGT ESALVFYPGG KVEAQAYAEL LHALAEGGVD CFLVDMPFNL AFFGVDKAAS IQDAYDFDQW YMGGHSLGGV AAASYAAKHM DQLDGIVLLA SYSVDDLNGE GFSALSIYGS DDGVLNRSSY DENLANLPDA AVQTVIEGGN HAQFGNYGQQ KNDGDAAVSA EEQQRQTVDA ILEFVES
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