Gene Shel_16920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16920 
Symbol 
ID8395582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1901386 
End bp1902144 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content61% 
IMG OID644986446 
Productuncharacterized component of anaerobic dehydrogenase 
Protein accessionYP_003144060 
Protein GI257064388 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.990137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATA CCGCTGACAC CACCATGCTG GATACCGTCG ATACGGCTGC CGAGGCCGAG 
GAACTTACAC CTGCCGAGCT GGCTGCCGAA TGCGAGGCGC GCGCCGCCAC ATATGCGCTG
CTTTCGCGCC TGTACAACCT GGAAGTCGAC GAGAAGTACC TGAACGCCCT TAAAGAGATG
CTCTACCCCG TCGAATCGGG CAACGAGCTC ATGAACGAAG GCCACTACCA CATCGCCAAA
TACCTCAGCA ACAGCTGGGT GGAGCCTTTG ACCGACCTGT CCGTCGACTA CGGCCGCACG
TTTTTGGGGT CGGGCATAGA CACCTACGCG GCCGCCTATC CTTTCGAGAG CGTGTATACA
TCCGAACGGC GCCTGCTCAT GGCGGACGCT CGCGACGAGG TGCTGGCCAT CTACCGCGCG
AACGGCCTGG ACAAGTCCGA CAAATGGACC GTCGGCGAGG ACCACATCTC CGTCGAGCTG
GAGTTCATGC GCATCCTGTG CCTGCGCGCC GCCCGGGCGC TTTCCGAAGG CGACATGGAC
CGTGCATTCC GCCTGTTCAA GACTCAGCAG GGCTTTCTCG AGCAGCATAT CTGCATTTGG
ACGCCGGTAT TCACGGCCGA CATCCGCCGC TTTTCGAACA CGTCCTTCTA CCAGGGCATC
GCCGAGCTTA CGGACGGTTT CCTCCAAACC GAGACCGATC TCCTTGCCTC GCTGGTGGGC
GACAACTCCG AAGATGCGGA TGCGGAAGCC GAGGCTTAG
 
Protein sequence
MSDTADTTML DTVDTAAEAE ELTPAELAAE CEARAATYAL LSRLYNLEVD EKYLNALKEM 
LYPVESGNEL MNEGHYHIAK YLSNSWVEPL TDLSVDYGRT FLGSGIDTYA AAYPFESVYT
SERRLLMADA RDEVLAIYRA NGLDKSDKWT VGEDHISVEL EFMRILCLRA ARALSEGDMD
RAFRLFKTQQ GFLEQHICIW TPVFTADIRR FSNTSFYQGI AELTDGFLQT ETDLLASLVG
DNSEDADAEA EA