Gene Shel_16870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16870 
Symbol 
ID8395577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1894609 
End bp1895478 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content61% 
IMG OID644986441 
Producthypothetical protein 
Protein accessionYP_003144055 
Protein GI257064383 
COG category[R] General function prediction only 
COG ID[COG3302] DMSO reductase anchor subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTTC AGATTCCTCT TGTGATCTTC ACGTCCTTCT TGGCTTGGGC GGCCGGCTCG 
TACGCGACCC AGTGCATTCT GGCCTTCAAG GGCAAGGCCC GTTCCATCCA GCAGCTGGCC
ATCATAGTTT CCGTGGTCAT CCTGGCCGTC GGCGGCATCG CCGTCACGTT CCATCTGACG
CACCTGTTCA ACATCTTCAA GGGCTTCGGG CATCTGAGCT CGGGCATCAC CCAGGAGCTC
ATCGCCATCG TGCTGATGGT CGTCGTCATG CTGATCCATT TCCTGATGGT GCGCCGTTCC
GAATCCGGCG ACACCCCGAA ATGGGTTGCC GTTGCGGGCG TTTTGGTGTC GCTGGTTCTG
ATCGTCGCTA TGGGCCATTC CTACATGATG CCAGCGCGCC CTGCATGGGA TTCCGTGCTG
CAGCTGCTGT CGCTGCTCGG CGCCGCTTGC ATCCTGGGTC CCGCGACGGT GGCTGTGCTT
GCCGCCGTCA AGGGCGAACA GGTCGAAGAG CTCGGCATGT ACAACCTGAT CGGCACCGCG
GCCAACGCCG TGCTGGCAGC GGCCTACCTG GGATTCATGC AGGTCGCATC GTCCTCGCTG
CAGTCGTTCG CCTACTACTT CGACCCTACG CATCCGAACT ACGCCCTGAA GGCGTCCGCC
GATGTGAGCA TCTTCTCCGG CAGCGCGCTG CCTGCGACCG TTATCGCTAT TGTCGCCATC
GTGGTGTCCC TGCTGGCGGT GTTCATGGGG AAGAAGGACG GCAACTGGAA GCTGTGGGGA
GCCGTGATCG TTGCGGCTGG GCTTGTGTGC GCCTTCGCGC TGCGCGTCGT CATGTACGTG
ATGGGTGCGT CCCTGTTCAT GATCTACTAA
 
Protein sequence
MEVQIPLVIF TSFLAWAAGS YATQCILAFK GKARSIQQLA IIVSVVILAV GGIAVTFHLT 
HLFNIFKGFG HLSSGITQEL IAIVLMVVVM LIHFLMVRRS ESGDTPKWVA VAGVLVSLVL
IVAMGHSYMM PARPAWDSVL QLLSLLGAAC ILGPATVAVL AAVKGEQVEE LGMYNLIGTA
ANAVLAAAYL GFMQVASSSL QSFAYYFDPT HPNYALKASA DVSIFSGSAL PATVIAIVAI
VVSLLAVFMG KKDGNWKLWG AVIVAAGLVC AFALRVVMYV MGASLFMIY