Gene Shel_16840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_16840 
Symbol 
ID8395574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1891859 
End bp1892809 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content62% 
IMG OID644986438 
Product4Fe-4S protein 
Protein accessionYP_003144052 
Protein GI257064380 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.34622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.811902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGACGA TAGTCGCCAG CGCCGTGTTC TTGGTGCTTG CCGTCTGCCT GGTCACCGGC 
GTGTCCACCG GCACGCTCTG CGGTTTCGGA TGGGGCGACA TCGCCTTGCT TTGCCCCTTG
GGGGCCATCG AGACCATGAT CGCATCGCGG ATGCTTGCGC CCAGAGCCCT TGTCAGCATC
GTCGTTATGG CCGGTCTGGT GTTCTTCGTC GGACGGGCGT TCTGCAGCTG GGTCTGTCCT
GTGACTGTGC TTAACCATGT GCGGGATTTC TTCACGCCTC AGAAGAAGCG TCGCGAGGCG
CAGGCTCAAC GCGAGAGCGA GAACAGGGAC ATCGCCCGGT TCGAGATTGC CAAGTCGTTG
GGGCACGACT GCTCGTCGTG CAAGGCCGTG CGCAGCAAGC AGTCCAAACT GGACAGCCGC
CATGCCGTGC TGGGCGGAGC CATTCTCTCG GCTGCGGTTT TCGGATTCCC GGTGTTCTGC
CTGGTGTGTC CTGTCGGATT ATCGTTTGCG ACGGTGCTCG TGGTCGTGCG CCTCTTCGGT
GTCGGCGACG TGACCTGGTC GGCGGTCATC ATTCCCGCCA TGCTGCTTAT CGAGGTCCTG
TTCCTGCGCA AGTGGTGCAC CCGGTTCTGC CCGCTGTCGG CGCTGATGAA CCTGGTGGGT
CGTTTCAGCA GGACGACGGT GCCCGAAATC GACAACGCGC TGTGCCTGGA GACGTCGAAG
GGTAGCCCCT GCAGCAAATG CGCCAGCGTG TGCTCGTTCG ACATCAATTT ACGTCATCCT
GAGTACGGCG AGCTAGGCAA ACGCGATTGC AGCCGATGCA TGGATTGCGT GCAGGAATGC
CCGGCGGGAG CCATCAGGAT GGTTGCGATT AACAATGCCG AAGAGCCGTT CGCGGTGCTG
CCGCAGGTTG AGAAGGTGTC CGAATCCGCT TCGACCACGA ACGGCGCATA A
 
Protein sequence
MRTIVASAVF LVLAVCLVTG VSTGTLCGFG WGDIALLCPL GAIETMIASR MLAPRALVSI 
VVMAGLVFFV GRAFCSWVCP VTVLNHVRDF FTPQKKRREA QAQRESENRD IARFEIAKSL
GHDCSSCKAV RSKQSKLDSR HAVLGGAILS AAVFGFPVFC LVCPVGLSFA TVLVVVRLFG
VGDVTWSAVI IPAMLLIEVL FLRKWCTRFC PLSALMNLVG RFSRTTVPEI DNALCLETSK
GSPCSKCASV CSFDINLRHP EYGELGKRDC SRCMDCVQEC PAGAIRMVAI NNAEEPFAVL
PQVEKVSESA STTNGA