Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_16140 |
Symbol | |
ID | 8395504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1816003 |
End bp | 1816929 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644986368 |
Product | hypothetical protein |
Protein accession | YP_003143982 |
Protein GI | 257064310 |
COG category | [S] Function unknown |
COG ID | [COG1307] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00762] EDD domain protein, DegV family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000224707 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGCAC AATGCAATTT GATCATCGAC TCCTGCAGCG ACCTGCCGGC TTCCGTTGTG GACCGGGAGG GCATCACGCT GCTCGAGTTT CCGTTCTTCT TCGGCGAAGA GGAGCATAAA GACGACCTCT GGCGATCGAT GACCGTCAGC GAGTTCTACG GTCGCATGCG CAAAGGCGAA CAGCCTTCCA CCGCGCAGCT TCCCATTTCT GAACTGACCG ACGTCTTCAC CAAGGCCGCG CAAAGCGGCG TGCCGACGGT GTACATCAGC TTCACGGCCG GCCTGTCCGG CTCCTTCGAC CTGGCTTGCA TGATCCGCGA CCAGGTGGTT GCCGAATACC CCGAGGCTGA ACTGTACGTC GTCGATACGC TTCTGGCATC CACGGCCGAG GCATTCATCG TGTATGAAGC CCTTCGCCAG CGCGAGAAGG GTCTGACCGC CAAGGAGATG GTGGCGTGGG TCGAAGAGGC GCGCTATTTC GTGAACTGCA TGTTCATGGT GGATGATTTG GAATCGCTGC GTCGCGGCGG ACGCATTCCC GATGCCGTCG CCTATGCCGG CGCCAAGCTT GATGTGAAAC CCATGCTCAC CATCGGTCTG GACGGCAGGC TGTCCATGCG CGGCGTAGCC CGCGGCCGCA AGAAGGGCAT TCGCCAGATG GCCGAGTTCT ACAACAGCCA TGTGGACCGC AACAACCCGT CGCAGACCGT CGCCACCGGC AACGCCGACT GCCCGAAGGA CGCGCAGCGT CTGCAGGAGC TTATCTCCAA GGAGAACGAC GGCGTCATGT TCCTGGATTC CACGATCGGC CCCGTCATCG GCTGCCACGT GGGACCCGAC ATGGTGTCCA TCGTGTTCTG GGGCGGCGAC CGCCGCGAGG ACCTTTCGGT GGCTGACCGC ATCGCCCGCC GCGTCCGCGG CGCCTAA
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Protein sequence | MTAQCNLIID SCSDLPASVV DREGITLLEF PFFFGEEEHK DDLWRSMTVS EFYGRMRKGE QPSTAQLPIS ELTDVFTKAA QSGVPTVYIS FTAGLSGSFD LACMIRDQVV AEYPEAELYV VDTLLASTAE AFIVYEALRQ REKGLTAKEM VAWVEEARYF VNCMFMVDDL ESLRRGGRIP DAVAYAGAKL DVKPMLTIGL DGRLSMRGVA RGRKKGIRQM AEFYNSHVDR NNPSQTVATG NADCPKDAQR LQELISKEND GVMFLDSTIG PVIGCHVGPD MVSIVFWGGD RREDLSVADR IARRVRGA
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