| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_15160 |
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| Symbol | |
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| ID | 8395406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1739978 |
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| End bp | 1741564 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 644986270 |
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| Product | cell envelope-related function transcriptional attenuator common domain protein |
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| Protein accession | YP_003143885 |
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| Protein GI | 257064213 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.481311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.251457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCA AACGTAGACC GCCCAGCTCG TCGCAGATCA ACCGAACCTC GCAGCAGGTA
CGCAACGCGA GCGTTACCAA CCGAATAACC ACGAACCGCA TCACGTCGAC GTCCAAGCGC
CGTCAGATCA GCAACACGCG AAAAACCAGG GCCGTTCGCC AGGGCGAGAT CAGCCATGTG
CTGCCCGATT CATCCTCGAG GGAGTCGCGT CGCGAATACG AATCGCGCAT GGCGCGCCCG
CAGTATTTCG AACGGGAGAG CATAAACAGG CGCAAGCAGT CGATGCATGC GCTCATACCC
ATTATCCTGG GGGCGCTGCT CGTTGCGGCG ATCATTTTCG GGTTCGTGTA CCTGAAAGTG
CTGGACAGCC GTGTAATGTA CAACGATGAC GCCCTGGACG CCGTCCTTGC CGAACCTGCG
TCTGGCGAGC CGTACTACCT GCTGTTGGCA GGCGACTTCG CAAAAGACGG CGAGGCCTCC
GAAACCGATG CGGTTGTGCT GGTCAGAATC GACGAGGCCG CCAACAGGGC CGATGTGATC
GGCATCCCTT CGAACACGCG GATTTCCGTA TCCGACGGGT CGAATGTTCT GCTTAAAGAC
GTGATTTCCT CGTCGGGCCC CGCCGAGATG GTCTACGGGC TGCAGAACCT GTTGGGCATC
GACATTGCAC ACGTCATGAC CACGGATGCC GACGGCTTCG TCGAGCTGGT CGACATGCTC
GACGGGGTCA CAGTGGTGGT CGAAGACAAC GTGGTCGACC AGGACGCCGG CGACATCATT
TTGTCTCCCG GACGCCAGCA CCTCACAGGC GAGGAGGCGC TGTACCTATG CCGCGCCAAC
GATTACGCAT CGACGGACAA CGTTCGCGAA CGCATGGTTT CGGCCGTGGC CATCGGCCTA
TACCACGACG CCTGCAATCT GGGCACCTTG AAGTACGCTG TCAGCATGGA CCGCATGTCG
AAGCTCTTTA AGAGCGATAT GGGCACGCGC GAAATGCGTT CGCTTCTGAA AGACCTGAAG
GACCTGCGCA AGGGCGAGCT GTACGCGGCC TCCATCCAGA CCTACACCGC GTCCGAAGAG
GGGAGCATGT ACGAGACGGT TGATCTAGAC AACTGGGCTG AGATGCTCGA ACGCATCGAT
GCCGGCGAAG AGCCCCAGGT CGACCCGCTG GCAGCCATTA AGGCCGTCGA TCCCGCATCG
TTCACCGTCA CCGTGAACAA CGGAGGCGAG GTTGTGGGCG CCGCCACCCA GGCAGGCGAA
ATCTTGACCG ACCAGGGCTT CAAGGTCGAA TCCATCGGAA ACGCCAACAT GGCCGTGTAT
GACGAGACGC TGGTTGTGTA CCAAGATATG GACCTGGCCG ATTCCGCCGA GGCGGTCGTC
ACCACCTTGG GCATCGGCCG TGCCATATAC GACCCTGTGT ACTACGCGTT CAACACCGAC
GTGCTTGTGG TCGTGGGCAA CGACTGGGAT GTGGATTCGC GTACCATAGC GGAAGCCGAA
GCCGCTAAGG CCATCTCCGG CGAAGGTTCC GGTGACGTCG ATGCGGTCCA AGACGAAACA
ACCCAAACCC AGGAAACCCA GGAATAG
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| Protein sequence | MPIKRRPPSS SQINRTSQQV RNASVTNRIT TNRITSTSKR RQISNTRKTR AVRQGEISHV
LPDSSSRESR REYESRMARP QYFERESINR RKQSMHALIP IILGALLVAA IIFGFVYLKV
LDSRVMYNDD ALDAVLAEPA SGEPYYLLLA GDFAKDGEAS ETDAVVLVRI DEAANRADVI
GIPSNTRISV SDGSNVLLKD VISSSGPAEM VYGLQNLLGI DIAHVMTTDA DGFVELVDML
DGVTVVVEDN VVDQDAGDII LSPGRQHLTG EEALYLCRAN DYASTDNVRE RMVSAVAIGL
YHDACNLGTL KYAVSMDRMS KLFKSDMGTR EMRSLLKDLK DLRKGELYAA SIQTYTASEE
GSMYETVDLD NWAEMLERID AGEEPQVDPL AAIKAVDPAS FTVTVNNGGE VVGAATQAGE
ILTDQGFKVE SIGNANMAVY DETLVVYQDM DLADSAEAVV TTLGIGRAIY DPVYYAFNTD
VLVVVGNDWD VDSRTIAEAE AAKAISGEGS GDVDAVQDET TQTQETQE
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