218 homologs were found in PanDaTox collection
for query gene Shel_15160 on replicon NC_013165
Organism: Slackia heliotrinireducens DSM 20476



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013165  Shel_15160  cell envelope-related function transcriptional attenuator common domain protein  100 
 
 
528 aa  1073    Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.481311  normal  0.251457 
 
 
-
 
NC_013204  Elen_1106  cell envelope-related transcriptional attenuator  33.26 
 
 
497 aa  236  1.0000000000000001e-60  Eggerthella lenta DSM 2243  Bacteria  normal  0.0413788  hitchhiker  0.0000000000000467776 
 
 
-
 
NC_013170  Ccur_12240  transcriptional regulator  29.97 
 
 
396 aa  162  1e-38  Cryptobacterium curtum DSM 15641  Bacteria  unclonable  0.000000172976  normal 
 
 
-
 
NC_013170  Ccur_01650  cell envelope-related function transcriptional attenuator common domain protein  27.29 
 
 
512 aa  156  7e-37  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.475151  hitchhiker  0.0000000000510123 
 
 
-
 
NC_013204  Elen_3000  cell envelope-related transcriptional attenuator  28.13 
 
 
495 aa  145  1e-33  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_013165  Shel_01960  cell envelope-related function transcriptional attenuator common domain protein  31.78 
 
 
490 aa  145  2e-33  Slackia heliotrinireducens DSM 20476  Bacteria  hitchhiker  0.00481524  normal 
 
 
-
 
NC_013203  Apar_0187  cell envelope-related transcriptional attenuator  23.99 
 
 
563 aa  109  1e-22  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.234515 
 
 
-
 
NC_013165  Shel_01950  cell envelope-related function transcriptional attenuator common domain protein  28.05 
 
 
516 aa  99  2e-19  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.000132864  normal 
 
 
-
 
NC_013203  Apar_1295  cell envelope-related transcriptional attenuator  28.37 
 
 
407 aa  98.6  3e-19  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.865299 
 
 
-
 
NC_013170  Ccur_08290  cell envelope-related function transcriptional attenuator common domain protein  25.79 
 
 
443 aa  93.6  7e-18  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.154905  normal  0.235154 
 
 
-
 
NC_013204  Elen_3081  cell envelope-related transcriptional attenuator  24.71 
 
 
531 aa  85.1  0.000000000000003  Eggerthella lenta DSM 2243  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0125  putative transcriptional regulator  27.03 
 
 
380 aa  82.4  0.00000000000002  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  hitchhiker  0.00440963  n/a   
 
 
-
 
NC_013204  Elen_2449  cell envelope-related transcriptional attenuator  25.56 
 
 
406 aa  82.4  0.00000000000002  Eggerthella lenta DSM 2243  Bacteria  hitchhiker  0.00377769  normal 
 
 
-
 
NC_011899  Hore_13390  cell envelope-related transcriptional attenuator  21.29 
 
 
405 aa  80.5  0.00000000000007  Halothermothrix orenii H 168  Bacteria  normal  0.557039  n/a   
 
 
-
 
NC_009253  Dred_3112  cell envelope-related transcriptional attenuator  28.21 
 
 
419 aa  79.7  0.0000000000001  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0132049  n/a   
 
 
-
 
NC_008346  Swol_1921  cell envelope-related transcriptional attenuator  24.06 
 
 
406 aa  77.8  0.0000000000005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.116318  n/a   
 
 
-
 
NC_007333  Tfu_2542  cell envelope-related transcriptional attenuator  26.35 
 
 
509 aa  77  0.0000000000007  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1145  cell envelope-related transcriptional attenuator  26.39 
 
 
543 aa  76.6  0.000000000001  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2366  cell envelope-related transcriptional attenuator  25.99 
 
 
319 aa  75.9  0.000000000002  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000181907  unclonable  0.00000001 
 
 
-
 
NC_013595  Sros_1348  Transcriptional regulator-like protein  25 
 
 
505 aa  74.3  0.000000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.958942  normal 
 
 
-
 
NC_011830  Dhaf_4100  cell envelope-related transcriptional attenuator  25 
 
 
426 aa  72.8  0.00000000001  Desulfitobacterium hafniense DCB-2  Bacteria  unclonable  0.000000000000199964  n/a   
 
 
-
 
NC_013216  Dtox_4120  cell envelope-related transcriptional attenuator  26.7 
 
 
445 aa  72.4  0.00000000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000955467  unclonable  0.000000000378568 
 
 
-
 
NC_013205  Aaci_1875  cell envelope-related transcriptional attenuator  28.3 
 
 
344 aa  72  0.00000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0624  cell envelope-related transcriptional attenuator  24.49 
 
 
481 aa  71.2  0.00000000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_3735  cell envelope-related transcriptional attenuator  26.82 
 
 
383 aa  70.5  0.00000000007  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_0411  cell envelope-related transcriptional attenuator  24.19 
 
 
520 aa  69.3  0.0000000001  Acidothermus cellulolyticus 11B  Bacteria  normal  0.118906  normal 
 
 
-
 
NC_013595  Sros_1363  Transcriptional regulator-like protein  22.86 
 
 
530 aa  68.2  0.0000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.640186  normal 
 
 
-
 
NC_013441  Gbro_3920  cell envelope-related function transcriptional attenuator, LytR/CpsA family  26.82 
 
 
734 aa  67.4  0.0000000007  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_1399  cell envelope-related transcriptional attenuator  26.64 
 
 
414 aa  66.6  0.000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009674  Bcer98_0523  cell envelope-related transcriptional attenuator  26.67 
 
 
337 aa  66.6  0.000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5902  cell envelope-related transcriptional attenuator  24.4 
 
 
625 aa  66.6  0.000000001  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4461  cell envelope-related transcriptional attenuator  23.38 
 
 
390 aa  64.7  0.000000004  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0712  cell envelope-related transcriptional attenuator  25.81 
 
 
573 aa  64.3  0.000000005  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_5288  transcription antiterminator, LytR family  27.33 
 
 
375 aa  64.3  0.000000006  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000327862 
 
 
-
 
NC_008261  CPF_2170  cell envelope-related function transcriptional attenuator  23.36 
 
 
473 aa  63.9  0.000000008  Clostridium perfringens ATCC 13124  Bacteria  normal  0.582429  n/a   
 
 
-
 
NC_005945  BAS5047  LytR family transcription antiterminator  27.49 
 
 
375 aa  63.5  0.00000001  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4877  LytR family transcriptional regulator  27.49 
 
 
375 aa  63.5  0.00000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4892  LytR family transcriptional regulator  27.49 
 
 
375 aa  63.5  0.00000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5432  LytR family transcription antiterminator  27.49 
 
 
375 aa  63.5  0.00000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5364  transcription antiterminator, LytR family  24.76 
 
 
377 aa  62.8  0.00000001  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5640  transcription antiterminator, LytR family  26.9 
 
 
372 aa  62.8  0.00000001  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.00000000000247251 
 
 
-
 
NC_003909  BCE_0673  LytR family transcription antiterminator  25.77 
 
 
337 aa  62  0.00000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5306  LytR family transcription antiterminator  26.19 
 
 
377 aa  62.4  0.00000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0572  LytR family transcription antiterminator  26.18 
 
 
337 aa  62.4  0.00000002  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4695  transcription antiterminator, LytR family  26.29 
 
 
338 aa  62.8  0.00000002  Bacillus cereus G9842  Bacteria  normal  0.541641  hitchhiker  0.0000000308245 
 
 
-
 
NC_005957  BT9727_0516  LytR family transcriptional regulator  26.18 
 
 
337 aa  62.4  0.00000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0516  LytR family transcriptional regulator  26.18 
 
 
337 aa  62.8  0.00000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0661  transcription antiterminator, LytR family  26.18 
 
 
338 aa  62.4  0.00000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.34714e-25 
 
 
-
 
NC_007530  GBAA_0605  LytR family transcription antiterminator  26.18 
 
 
333 aa  62.4  0.00000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0570  cell envelope-related transcriptional attenuator  27.37 
 
 
377 aa  62.4  0.00000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008262  CPR_1881  cell envelope-related function transcriptional attenuator  24.69 
 
 
460 aa  62.4  0.00000002  Clostridium perfringens SM101  Bacteria  normal  0.723477  n/a   
 
 
-
 
NC_009487  SaurJH9_2334  cell envelope-related transcriptional attenuator  26.9 
 
 
318 aa  62.8  0.00000002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.591324  n/a   
 
 
-
 
NC_009632  SaurJH1_2377  transcription attenuator LytR  26.9 
 
 
318 aa  62.8  0.00000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5319  transcription antiterminator, LytR family  26.9 
 
 
374 aa  62.4  0.00000002  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0643  transcription antiterminator, LytR family  26.29 
 
 
338 aa  62.4  0.00000002  Bacillus cereus B4264  Bacteria  normal  0.849345  n/a   
 
 
-
 
NC_011658  BCAH187_A0732  transcription antiterminator, LytR family  26.29 
 
 
338 aa  62.4  0.00000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3243  cell envelope-related transcriptional attenuator  29.79 
 
 
335 aa  62  0.00000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007604  Synpcc7942_0961  cell envelope-related function transcriptional attenuator  25.08 
 
 
337 aa  61.2  0.00000004  Synechococcus elongatus PCC 7942  Bacteria  normal  0.472241  normal 
 
 
-
 
NC_013522  Taci_0893  cell envelope-related transcriptional attenuator  24.82 
 
 
453 aa  61.2  0.00000005  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  0.301121  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0519  cell envelope-related transcriptional attenuator  27.78 
 
 
338 aa  60.8  0.00000005  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4992  cell envelope-related transcriptional attenuator  27.4 
 
 
374 aa  60.8  0.00000006  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1876  cell envelope-related transcriptional attenuator  24.31 
 
 
455 aa  60.1  0.00000009  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000275813  normal 
 
 
-
 
NC_009674  Bcer98_0803  cell envelope-related transcriptional attenuator  25.77 
 
 
317 aa  60.1  0.00000009  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_1591  cell envelope-related transcriptional attenuator  26.45 
 
 
336 aa  59.7  0.0000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.230007  n/a   
 
 
-
 
NC_003909  BCE_3605  LytR family transcription antiterminator  24.65 
 
 
345 aa  59.7  0.0000001  Bacillus cereus ATCC 10987  Bacteria  normal  0.0149783  n/a   
 
 
-
 
NC_013385  Adeg_1973  cell envelope-related transcriptional attenuator  21.74 
 
 
418 aa  59.7  0.0000001  Ammonifex degensii KC4  Bacteria  normal  0.554316  n/a   
 
 
-
 
NC_013441  Gbro_0172  cell envelope-related function transcriptional attenuator, LytR/CpsA family  29.01 
 
 
307 aa  59.7  0.0000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.954157  n/a   
 
 
-
 
NC_010424  Daud_2095  cell envelope-related transcriptional attenuator  24.82 
 
 
411 aa  59.7  0.0000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A3613  transcription antiterminator, LytR family  24.65 
 
 
345 aa  59.7  0.0000001  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000276906  n/a   
 
 
-
 
NC_013721  HMPREF0424_0588  putative transcriptional regulator  24.32 
 
 
432 aa  59.3  0.0000002  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  0.952975 
 
 
-
 
NC_013159  Svir_37600  cell envelope-related function transcriptional attenuator common domain protein  25.11 
 
 
619 aa  59.3  0.0000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.760055  normal  0.249296 
 
 
-
 
NC_011729  PCC7424_2953  cell envelope-related transcriptional attenuator  23.2 
 
 
502 aa  58.9  0.0000002  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.873931 
 
 
-
 
NC_013739  Cwoe_4615  cell envelope-related transcriptional attenuator  30.23 
 
 
510 aa  58.9  0.0000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_4976  cell envelope-related transcriptional attenuator  27.21 
 
 
551 aa  58.5  0.0000003  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_13296  CPSA-related protein  23.21 
 
 
497 aa  57.8  0.0000004  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000000747689  normal 
 
 
-
 
NC_013595  Sros_9260  Transcriptional regulator-like protein  24.67 
 
 
481 aa  58.2  0.0000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.969868 
 
 
-
 
NC_009523  RoseRS_0131  cell envelope-related transcriptional attenuator  23.55 
 
 
353 aa  57.8  0.0000005  Roseiflexus sp. RS-1  Bacteria  normal  0.763008  normal 
 
 
-
 
NC_013947  Snas_6384  cell envelope-related transcriptional attenuator  22.26 
 
 
352 aa  57.8  0.0000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_3582  cell envelope-related transcriptional attenuator  23.68 
 
 
492 aa  57.4  0.0000006  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3223  cell envelope-like transcriptional attenuator  31.4 
 
 
471 aa  57.4  0.0000006  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4114  cell envelope-related transcriptional attenuator  23.48 
 
 
549 aa  57  0.0000008  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9275  Transcriptional regulator-like protein  34.52 
 
 
457 aa  56.2  0.000001  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0400  cell envelope-related transcriptional attenuator  24.41 
 
 
308 aa  56.2  0.000001  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000257107  n/a   
 
 
-
 
NC_003909  BCE_2056  LytR family transcription antiterminator  25.51 
 
 
333 aa  55.8  0.000002  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.00905786  n/a   
 
 
-
 
NC_005945  BAS1830  LytR family transcription antiterminator  25.51 
 
 
333 aa  55.5  0.000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.241912  n/a   
 
 
-
 
NC_011773  BCAH820_2008  transcription antiterminator, LytR family  25.51 
 
 
333 aa  55.5  0.000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  6.0610299999999994e-43 
 
 
-
 
NC_005957  BT9727_1804  LytR family transcriptional regulator  25.51 
 
 
333 aa  55.5  0.000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00220424  n/a   
 
 
-
 
NC_007530  GBAA_1973  LytR family transcription antiterminator  25.51 
 
 
333 aa  55.5  0.000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1852  cell envelope-related function transcriptional attenuator, LytR/CpsA family  24.04 
 
 
676 aa  55.8  0.000002  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_30000  cell envelope-related function transcriptional attenuator common domain  31.11 
 
 
395 aa  55.5  0.000002  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1307  cell envelope-related transcriptional attenuator  22.42 
 
 
520 aa  55.5  0.000002  Frankia sp. EAN1pec  Bacteria  normal  0.386656  normal 
 
 
-
 
NC_013172  Bfae_09330  cell envelope-related function transcriptional attenuator common domain  27.15 
 
 
349 aa  55.8  0.000002  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013171  Apre_1005  cell envelope-related transcriptional attenuator  24.47 
 
 
285 aa  55.5  0.000003  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3347  transcriptional regulator LytR, attenuator for lytABC and lytR expression  26.13 
 
 
345 aa  55.1  0.000003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.000000255205  n/a   
 
 
-
 
NC_011658  BCAH187_A2078  transcription antiterminator, LytR family  25.51 
 
 
333 aa  55.1  0.000003  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000542577  n/a   
 
 
-
 
NC_006274  BCZK1787  LytR family transcriptional regulator  25.51 
 
 
335 aa  55.5  0.000003  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_0784  cell envelope-related transcriptional attenuator  22.81 
 
 
400 aa  55.1  0.000003  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5665  cell envelope-related transcriptional attenuator  27.7 
 
 
306 aa  55.1  0.000003  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.304907  normal  0.0393509 
 
 
-
 
NC_009674  Bcer98_1499  cell envelope-related transcriptional attenuator  29.85 
 
 
329 aa  55.5  0.000003  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.000000186761  n/a   
 
 
-
 
NC_013174  Jden_1864  cell envelope-related transcriptional attenuator  25.84 
 
 
391 aa  55.1  0.000003  Jonesia denitrificans DSM 20603  Bacteria  normal  0.383316  normal  0.036217 
 
 
-
 
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