Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_14460 |
Symbol | |
ID | 8395336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1655353 |
End bp | 1657626 |
Gene Length | 2274 bp |
Protein Length | 757 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644986200 |
Product | glucan-binding domain-containing protein |
Protein accession | YP_003143815 |
Protein GI | 257064143 |
COG category | [R] General function prediction only |
COG ID | [COG5263] FOG: Glucan-binding domain (YG repeat) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.706218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.855897 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGTTG CCCTTTGCAC CATGGGGATC GTTCCCGAGG CCTTCGCAGA CGAGACCGTT GACGCGGATG CAAACCAGGC TCTTGAAACT ACAACCGAAG ACGCTGATTC TGCCGCAGTG CAGGATGCAG AAAATGAAAC GCAAGCTGCC GAGCAGGACG AAATGGTCGA GGAGCTGCTT GCTGCCCTAG ACGAGGAAGA AGCTGCTTCT CAATCTGTCG AGTCTGCGGA TGAGCAGGCG GAGGAGGATC CATACGAGGT GGTCGACACG TCCGTGCCGG AGCCTTCCGG TTACGACAAG ATGGACTTCT ATGCCGAAGC TTCCGACGAA GACGGCCAGG TGAGAACTCT GGCTGAACCC ACAGTAACAC CGATGTATCT CTCCGATGAG ATGAAATACT TCGCAAAATA CGAGAGCAAT CAGAACTATG ACCAGGGGTT GAGCTACTTC GACGGATACC ACGCCGTCGG ATACTATCAG TTCGACAACC GCTACGACCT GCTTGAGTTC CTGATCGCCT GCTACAACTA CAATCCGAAG ACCTATTCCA TGTTCAAGTC GTACACCACG ATGACGGAAA GCAAATTCAA AGCCTGGAAC GCCATGTACG ACGGCGGTCT GACGTCTGTG GGCGCCACGC TGAACGCTTC CTGGCACGCC GCCTACAAGG CCAATCCCAA GGAATTCGCG GCGCTTCAGG ACGGCTGGGC CTACAAGAAC TATTACATTA TCGCGGAAGC GCACATGACC AGCATCGGAG TTCCCATCAA GAACCGCGCC GATTGTGTAA AAGGCCTTTG CTGGGGTATG TGCAATCTGT TCGGATCCGG AGGGTGGCGT CAGTTCGTGG GCGGCTACTA CTACGGTAAC AACCCTGGTG CTGGGCTTAA GAAGTCCATG TCGGACAGGC AATTCGTCAC GGTGCTCTGC AACTACGTGG TTAACAACGT GGCATACTTC TATCCGAGCC AGCCTCAATA CCATCAAGGC TGGCAAAACA GGTACCGCAA CGAGCTGAAA GACTGCGAGA ACTATCTGGG CACCATCGAG GTGGTAAACG GCCATATCAT GCTGAAGGAA GGCGGGTCCT ACGTGAAGAA CGCTTGGGGC TTCGCTGACG GGTATTGGTA CCGTTTCGAT GCCAACGGCT ACGCTCTGAC AAGTTGCTGG TGGAAATCGG GCAGCACCTG GTACCGTTTC GACGCCAACG GCAAAATGTA TGCTAATAGC TGGGCGAAAG TGAACGGCTC CTGGTATTAC TTCAAGAGCT CGGGCGCCAT GGTCACCGGA TGGTGCAAGG TCAACGGCTC GTGGTATTAC ATGAATGCCA GCGGCAGGAT GCTGACCGGT TGGCAGACCA TCACCTACAA CGGTGTGGAC CAAAGGTTCT ACTTCAGCGC AAGCGGGAAG ATGCTGACCG GTTGGCAGAC CATAGATGAC GGGGCACAGT TTTACTTCGA CAGCGCCGGC ATCATGCAAA AGGGTTGGCA GAAGCTCGAC AAGGGCGACG TGAAGGGGAA GTGGTATTAC CTCGATCCCG ATAGCGGCGT GATGCTGACC GGATTCCAAA AACTGCTGTA CAAGGGCGCA ACCAGTACGT TCTATTTCGA CTCCACGGGT GCCATGGCCA CAGAGTGGAA GAAGCTGTCG GGTGTCTGGT ACTACTTCAA CTCAGCAGGC ATCATGCAGA CGGGCCTGCA GAAGATCACG TCCGGGTCTA CCTCCAGATA CTATTACTTC AACGACGCGG GCAAGATGCT CACGGGCTGG CGGCAGATCG AATCGAACGG CGTCGTGAAG CGGTATTACT TCAACGCCAA CGGTGCCGCA GCCATCGGCT GGAAGAGTCT TGACGGCACC TGGTACTATT TCAACACCGA AGGCGTCATG CAGACCGGGT GGCAGAAGGT GGGCTCTGGA ACCTCTGCCA AATGGTATTT CTTCGATACC GAGGGAAAGA TGCTGACAGG CTTCCAGAAG ATTGTATACG GGGGTGTTGA GAAGACGTTC TATTTCAACG CGAACGGAGC CATGCAGACC GGCTGGCAGA AGCTTGCTCT TAACGGAAGA ACCAGCTGGT TCAGGTTCGC TTCGAACGGC ACCATGCTGA CCGGGTGGCA GACCATTGCC TACAACGGCA AGAACGAGAA ATTCTTCTTC ACGCCTGAAG GACGCATGGT CACTGGCGTT GTGACCATCA ATGACATGAA GTGCACGTTC GACAGCAACG GCGTCTTAAA GTCGCAGGTG GCCGTTGCGC CAAAGGCAGC ATAG
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Protein sequence | MTVALCTMGI VPEAFADETV DADANQALET TTEDADSAAV QDAENETQAA EQDEMVEELL AALDEEEAAS QSVESADEQA EEDPYEVVDT SVPEPSGYDK MDFYAEASDE DGQVRTLAEP TVTPMYLSDE MKYFAKYESN QNYDQGLSYF DGYHAVGYYQ FDNRYDLLEF LIACYNYNPK TYSMFKSYTT MTESKFKAWN AMYDGGLTSV GATLNASWHA AYKANPKEFA ALQDGWAYKN YYIIAEAHMT SIGVPIKNRA DCVKGLCWGM CNLFGSGGWR QFVGGYYYGN NPGAGLKKSM SDRQFVTVLC NYVVNNVAYF YPSQPQYHQG WQNRYRNELK DCENYLGTIE VVNGHIMLKE GGSYVKNAWG FADGYWYRFD ANGYALTSCW WKSGSTWYRF DANGKMYANS WAKVNGSWYY FKSSGAMVTG WCKVNGSWYY MNASGRMLTG WQTITYNGVD QRFYFSASGK MLTGWQTIDD GAQFYFDSAG IMQKGWQKLD KGDVKGKWYY LDPDSGVMLT GFQKLLYKGA TSTFYFDSTG AMATEWKKLS GVWYYFNSAG IMQTGLQKIT SGSTSRYYYF NDAGKMLTGW RQIESNGVVK RYYFNANGAA AIGWKSLDGT WYYFNTEGVM QTGWQKVGSG TSAKWYFFDT EGKMLTGFQK IVYGGVEKTF YFNANGAMQT GWQKLALNGR TSWFRFASNG TMLTGWQTIA YNGKNEKFFF TPEGRMVTGV VTINDMKCTF DSNGVLKSQV AVAPKAA
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