Gene Shel_14420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14420 
Symbol 
ID8395332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1648161 
End bp1649054 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content58% 
IMG OID644986196 
Productglycosyl transferase 
Protein accessionYP_003143811 
Protein GI257064139 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGGA AAGTGGTTGC CCTGACCCGG GCCGAGCTGA CGGGTGCGGG ATACGACTAC 
GAATTCGTCC TGGTAAACGA CGGTTCCACC GACGGCACGT TCGACGTCAT CCGCTCTCTT
CATGAAGAAG ACCCGAAGAT CATCGGTGTT AACCTGGCGA AGAACTTCGG CCAGCATAAC
GCCATCATGG CCGGATTGGG CCGCACGACC GGCGACTACG TCATGCTGAT GGATGACGAC
ATGCAGACCC ATCCTTCGCA ATGCCTGAAG CTGGTCCGTG AGATGGAAAA CGGTTGGGAC
GTGGTGTTCG CCGAGTTCCC CGAGCAGCAT GAGGCCTGGT GGCGACGTAT GGGATCCGCT
TTCACCATGT GGACCATGCG CACGTTGCAG CACCGTCCAA AGGGTGTCGA GTCCAGCAAC
TTCTTCGTCA TGCGCGACTA CATCGCCAAA GAAGCCGCCA AATACGAAGG TCCCTACGTA
TACGTGCAGG GCATCCTGTT CCGCATCACG CATAACATGA CGAATGTGCC GGTCGAGCAT
TTCGACCGTG AGAGCGGCGT GTCGGGATAC AACCTGAAAA GCCTGGTCCG CTTGTGGTCC
ATCGTGCTGA ACTTCTCCAT GGCGCCGCTT CGGGCGGCGG CAATCGTGGG CGCGGCGCTC
GGCTCGATCG GCCTGATCGG CGCCATCGCG CTCATTATCA GGCGTTTGCT GGATCCGACT
GTGGCCATGG GCTGGAGCTC GCTTATGGTC ACCATGCTTG TGTGCTCGGG TGCCATCATC
ATGTTCTTGG GGCTCATCGG TGAATACCTG GGACGCTTGT TCATGACCAT GAACAAAGCG
CCGCAGTACG TTGTAAAAGA GGTTCTTGAT GATAAGGCCG ACCATGACGA ATAA
 
Protein sequence
MIGKVVALTR AELTGAGYDY EFVLVNDGST DGTFDVIRSL HEEDPKIIGV NLAKNFGQHN 
AIMAGLGRTT GDYVMLMDDD MQTHPSQCLK LVREMENGWD VVFAEFPEQH EAWWRRMGSA
FTMWTMRTLQ HRPKGVESSN FFVMRDYIAK EAAKYEGPYV YVQGILFRIT HNMTNVPVEH
FDRESGVSGY NLKSLVRLWS IVLNFSMAPL RAAAIVGAAL GSIGLIGAIA LIIRRLLDPT
VAMGWSSLMV TMLVCSGAII MFLGLIGEYL GRLFMTMNKA PQYVVKEVLD DKADHDE