Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_14420 |
Symbol | |
ID | 8395332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1648161 |
End bp | 1649054 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644986196 |
Product | glycosyl transferase |
Protein accession | YP_003143811 |
Protein GI | 257064139 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTGGGA AAGTGGTTGC CCTGACCCGG GCCGAGCTGA CGGGTGCGGG ATACGACTAC GAATTCGTCC TGGTAAACGA CGGTTCCACC GACGGCACGT TCGACGTCAT CCGCTCTCTT CATGAAGAAG ACCCGAAGAT CATCGGTGTT AACCTGGCGA AGAACTTCGG CCAGCATAAC GCCATCATGG CCGGATTGGG CCGCACGACC GGCGACTACG TCATGCTGAT GGATGACGAC ATGCAGACCC ATCCTTCGCA ATGCCTGAAG CTGGTCCGTG AGATGGAAAA CGGTTGGGAC GTGGTGTTCG CCGAGTTCCC CGAGCAGCAT GAGGCCTGGT GGCGACGTAT GGGATCCGCT TTCACCATGT GGACCATGCG CACGTTGCAG CACCGTCCAA AGGGTGTCGA GTCCAGCAAC TTCTTCGTCA TGCGCGACTA CATCGCCAAA GAAGCCGCCA AATACGAAGG TCCCTACGTA TACGTGCAGG GCATCCTGTT CCGCATCACG CATAACATGA CGAATGTGCC GGTCGAGCAT TTCGACCGTG AGAGCGGCGT GTCGGGATAC AACCTGAAAA GCCTGGTCCG CTTGTGGTCC ATCGTGCTGA ACTTCTCCAT GGCGCCGCTT CGGGCGGCGG CAATCGTGGG CGCGGCGCTC GGCTCGATCG GCCTGATCGG CGCCATCGCG CTCATTATCA GGCGTTTGCT GGATCCGACT GTGGCCATGG GCTGGAGCTC GCTTATGGTC ACCATGCTTG TGTGCTCGGG TGCCATCATC ATGTTCTTGG GGCTCATCGG TGAATACCTG GGACGCTTGT TCATGACCAT GAACAAAGCG CCGCAGTACG TTGTAAAAGA GGTTCTTGAT GATAAGGCCG ACCATGACGA ATAA
|
Protein sequence | MIGKVVALTR AELTGAGYDY EFVLVNDGST DGTFDVIRSL HEEDPKIIGV NLAKNFGQHN AIMAGLGRTT GDYVMLMDDD MQTHPSQCLK LVREMENGWD VVFAEFPEQH EAWWRRMGSA FTMWTMRTLQ HRPKGVESSN FFVMRDYIAK EAAKYEGPYV YVQGILFRIT HNMTNVPVEH FDRESGVSGY NLKSLVRLWS IVLNFSMAPL RAAAIVGAAL GSIGLIGAIA LIIRRLLDPT VAMGWSSLMV TMLVCSGAII MFLGLIGEYL GRLFMTMNKA PQYVVKEVLD DKADHDE
|
| |