| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_14380 |
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| Symbol | |
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| ID | 8395328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 1642091 |
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| End bp | 1644892 |
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| Gene Length | 2802 bp |
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| Protein Length | 933 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644986192 |
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| Product | membrane protein YfhO |
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| Protein accession | YP_003143807 |
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| Protein GI | 257064135 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4485] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.966469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACA TACATCGCCG ACCGAATCGA ATACTCTATT ATGGATTGCT GTGGTGCGCC
TGCCTGTTGG GGCTGGCGCT CACTTCTATC GTGCTCATGC GTCATGGGCT TACGCATGTC
TGGGCCAATG ACAGCGTGCC CCAGGACATC AACTTCTTCA TCTATACCGG CGAATGGATC
CGCGCCTTCT TGGCCGGCCT CGTCACGGGG GAGTTCACGG CGCCCATGTT CACGTACAAC
CTGGGTTACG GTACCGATGT CTTTTGGTCG GTCATGGGCT TTTGGAACGA CCCCTTCAAC
CTGCTTTCGG TAATCTGGCC GCCTCAGCAT GCCGAAATCG CCTACGAGCT GCTTTTGTAT
GCGCGCATCG GCCTGTGCGC AACCTTTTTC GTCTGGTATG CGAAAAGCAA GGGGCACGGA
CCTTGGGCCT GTTTCGTCGG GGCCTTGGTC TACGCGTTTT CCGGTTATGT CATATTCCAA
GCCATCATGC ACCATGCTTC GTTTGTGAAC GTCGCGTTGG TGTTTCCGCT GGTCCTGCTG
GGAGCCGACC GGCTCTTCGA GGGCAAATCG CCCATCATGT ATATTCTTGC CCTGGCGTTC
TCGCTGTACA CGACCTTCTA TTTCACATAC ATGGTAGCGT TGGCTCTTAT CGTGTACTGC
ATAGCGAAAT ACGTGTTCGA ACGCGAGCAG AAATCCTTAT CTGACCTGGC GAAGCTTGTG
GCTCAGTTCA TCGGCTACGC GTTGTTGGGG CTCTGCATCG CGGGCGTTTC GGTGTTGCCC
GGCTTGTCCG TCGTGTTAAG CATGAGCCGT GTAGGCCTCG AGCGGTCTAT ACCGCTTCTC
TACGACGGCG GCAGGTATTG GAGCTTCGCC ACGGATCTGA TCGGCGGAAG CTCCTACGTC
GGCGGCCTGT GCATAGGCGC TGTCGGCGCT TTCTGTCTGA TCGTGTTCCT GGTCGGACGC
AAACGCATTG ATCGCAACAC CTGGCGAATC GTCCTTGTGG CGTTGATTGT GAGCCTGGTC
ATCGTTTGCG TGCCCAAGCT TGGTTCGGTC ACGAACGGCT TCGCGTATGT GAGCGACCGA
TGGCTGTTCG TATTCGATTT TGTCGCGGCC TATGCAACGG TATGCGCTGT TCCTGTGGTG
AAAGGCCTAT CTAAGCAGGA ATGGGGCCGT GTGTGTTTGG TGTCCGGCAT CCTTCTGGTG
CTATCTGGAA GCTACGGTTT TGTGTACGAA TCGCGCTGGG CTCTCATCAT GTGTGTCGGC
TTTGTGCTTG TTGTTGCGGC TTCTGTGGCG CTGGCGACGC GCATTCCCGA CGGCGCGTAT
GCGTTTTGCC TTGCTGCAGC CGTGCTTGTG GGCGCCGGGG CCACGGGCTG TTTGTATACG
GTGGCCTGGG GCGGAAATCA TCTCGGAGAG TTCAACTCAT CGGGCGTTTC TGTACCCCAG
CTCGATGATG CGGCCGTGGG GAAGGCGAGC GATCTTGAAA GCCAAGGTCT TTGGCGGCTG
AGTCCTGTCG ACCGTAAGGG TCCGAGGAAC GCAAGCCTCT ACCACGATGT AATGGCCATC
GATTTCTTCG GCAGCTACTA CAACCAGAAT GTGGATACAT TCCGCAGTGC ATTAGGCGTT
GCCGACAAGG ATTCTTGCTA TATTTTCGCG GGCAACGACG GTCGTACCGC CTTGGAGTAC
CTGACCGGTT CGAAATACGT CATCGTGGCC GACGGCACCG ATTGGCGCGT TCCTTATGGA
TACGAGGATA CGGGCATCGA CGCAGCCGAG GGGTATTCGT TCTACGTCAC GACGCATGCC
GCACCGCTTG CATTCATGTA CGATAACTCC TTATCGCTTG AAGCATTCAA CCAGCTGAAT
CTGGCGCAGC GTCAAGAAGC CATGCTTTCG GCATGCGTCT TGGAGGGCGG CGATGTCCAG
GACGGTCGCA GCATGGATTT GACGAGCGAA GCGTTGCCGT ATCGAATCGA AGACGCCGAT
GGTATCGAAT TCCGCGACGG CATGATATAC GCATCTAAGG ACAAGGCTTC GTTTGACCTT
GTGCTTCCCG AAGGCACGCA GGTGCCGGCC GGCTCGTTTG AGACCGAGGT CTGCTTCACG
GGTCTGCAAT ACGCTCCCGA TCCGCAGGAC ATGGCCGAAC GCCTGGCGGT GGATGAGCCG
CTTAAAAACA AGATCAAGCG GCTGTGCAGC AACCAGAACA ACGAATACAC CGAAATATAC
GTGTACACCG ATGATCGCGA AACGTACCTA TGCCTGTACG ATAATTTCAA CAAGCAATAC
AGCGGACGCG AGAATTGGGC GTTCAACCTG GGAACCTCTG AGGAGGCTCC CGAGACGATT
ACGGTATGGC TCTCCAAGAA AGGCTTCTAT ACCTACGACA CGTTGGATGT GCTGGCTCAG
CCCGGCGAGC CTCTGGCTGA GAAGGCCCAG GCGTTGCAGG CCGTTGCGGC CAGCCGGTTG
GAGCTGGGTG AGAATCGGAT CGACGCTCGT TTCGAGGTAT CGGATGAGGC CGTCCATTAC
GCGTTCGTTT CCGTCCCGTA TTCTAAGGGC TGGTCGGCTA TCGTCGATGG CAAACCGGCT
GAAATCCTTC AGGCGAACGT CGGGTTCATG GCGCTGCGTT TGCAGGGCGA AGGCGTCCAC
GACGTGCAGC TAACCTACCG AACGCCCTTG CTGCTCGAAG GCCTTGCCTG CACAATCGCT
GGCATAGCGG TCACGGTTGT GATCGGGATT CTGTTCGCGA GGAAGCGGGC CCGGTCGGCC
TATGACGAAC AACGTACAAA GCTAGCGGGT TTGAGTGAAT AG
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| Protein sequence | MADIHRRPNR ILYYGLLWCA CLLGLALTSI VLMRHGLTHV WANDSVPQDI NFFIYTGEWI
RAFLAGLVTG EFTAPMFTYN LGYGTDVFWS VMGFWNDPFN LLSVIWPPQH AEIAYELLLY
ARIGLCATFF VWYAKSKGHG PWACFVGALV YAFSGYVIFQ AIMHHASFVN VALVFPLVLL
GADRLFEGKS PIMYILALAF SLYTTFYFTY MVALALIVYC IAKYVFEREQ KSLSDLAKLV
AQFIGYALLG LCIAGVSVLP GLSVVLSMSR VGLERSIPLL YDGGRYWSFA TDLIGGSSYV
GGLCIGAVGA FCLIVFLVGR KRIDRNTWRI VLVALIVSLV IVCVPKLGSV TNGFAYVSDR
WLFVFDFVAA YATVCAVPVV KGLSKQEWGR VCLVSGILLV LSGSYGFVYE SRWALIMCVG
FVLVVAASVA LATRIPDGAY AFCLAAAVLV GAGATGCLYT VAWGGNHLGE FNSSGVSVPQ
LDDAAVGKAS DLESQGLWRL SPVDRKGPRN ASLYHDVMAI DFFGSYYNQN VDTFRSALGV
ADKDSCYIFA GNDGRTALEY LTGSKYVIVA DGTDWRVPYG YEDTGIDAAE GYSFYVTTHA
APLAFMYDNS LSLEAFNQLN LAQRQEAMLS ACVLEGGDVQ DGRSMDLTSE ALPYRIEDAD
GIEFRDGMIY ASKDKASFDL VLPEGTQVPA GSFETEVCFT GLQYAPDPQD MAERLAVDEP
LKNKIKRLCS NQNNEYTEIY VYTDDRETYL CLYDNFNKQY SGRENWAFNL GTSEEAPETI
TVWLSKKGFY TYDTLDVLAQ PGEPLAEKAQ ALQAVAASRL ELGENRIDAR FEVSDEAVHY
AFVSVPYSKG WSAIVDGKPA EILQANVGFM ALRLQGEGVH DVQLTYRTPL LLEGLACTIA
GIAVTVVIGI LFARKRARSA YDEQRTKLAG LSE
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