Gene Shel_14230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_14230 
Symbol 
ID8395313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1625270 
End bp1626178 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content61% 
IMG OID644986177 
Productrod shape-determining protein MreC 
Protein accessionYP_003143792 
Protein GI257064120 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATACG GCAACTCGAA CCAACACATG AGCGGATCTT CCAAGGGCAA CATTCTTATG 
GTTGCCCTTT TGGCATTATC TCTGGTGGTC GCCAGCGTGT ATGCCCGGGA GTCCGACGAA
GGCATCCTGC ATAACGTACA AGACGTGTTC GCGGTGGCGT CCACCCCCTT CGCGTACATG
AACGGCGCTA TTGGCTCGGC CGAACAGGCG GCGGGCGAAA GCATCGCCGA CGCGCGTGCA
GATGCCTCAT CCCTGACGGA GCTTCAGCAG GAGAACGCCG AGCTGCGCGC TGCGTTGGCG
GAAGCCGAAG AGTACCGTCT CGAGGCCGAG CGCCTGCAGG GGCTGCTGGA GCTACAAGAC
ATGTATTCCT TCAACCTGGT CACCGGGCGC ATTATCGGCG CGGTGCCGAA CGCCTGGGAC
AGGGTCATTA CGGTCAACGT GGGCACGAAG CAGGGTCTCG AAGCGGGCAT GCCCGTCATC
GGCCCGGGCG GGCTTATCGG GCAGGTTATC GACGTCACGC CTGTGACCTG CGAAATCCGT
TTGCTCGACG ACCCGGCCAG CGGCGTTTCC GTCATGTTGC AGTCCAGCCG CGGAACCGGC
GTCGTCAGCG GTTCGCTCGA GGGGCTTCTC TATCTGGAAA ACGTCGACCC CTCCGTCAAC
GTTGAAGTGG GCGATGTGGT CATGACCAGC GGCATGGGTG GAACCTACTA TGCGGGTTTG
CCTGTGGGAA CGGTGCTGAA TGTCGACGCG TCTTCGGGCA CATCGGACCG CACCATCATC
GTAGCGCCCT TTGCAAGCAC GGGGTCGCTT GAAGAAGTGA GCATCATACT GTCGATGGCG
GAAGTCGGAG AGACTGACCT TGAGGCCGAA GGCTCCGACG AAGTCGTAGC AGATGGGGAA
GGGGCGTAA
 
Protein sequence
MPYGNSNQHM SGSSKGNILM VALLALSLVV ASVYARESDE GILHNVQDVF AVASTPFAYM 
NGAIGSAEQA AGESIADARA DASSLTELQQ ENAELRAALA EAEEYRLEAE RLQGLLELQD
MYSFNLVTGR IIGAVPNAWD RVITVNVGTK QGLEAGMPVI GPGGLIGQVI DVTPVTCEIR
LLDDPASGVS VMLQSSRGTG VVSGSLEGLL YLENVDPSVN VEVGDVVMTS GMGGTYYAGL
PVGTVLNVDA SSGTSDRTII VAPFASTGSL EEVSIILSMA EVGETDLEAE GSDEVVADGE
GA