| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_13330 |
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| Symbol | |
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| ID | 8395224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1526741 |
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| End bp | 1527532 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644986088 |
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| Product | dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein |
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| Protein accession | YP_003143705 |
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| Protein GI | 257064033 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.350601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATACT TCGATTTCTC CGGTAAGGTC GTTGCCGTCA CTGGCGCTTC TTCGGGTCTG
GGCAAGCAGA TGGCCGAAGG CTATGCACAG CAGGGCGCAA ACCTGGTTCT CCTCGCTCGC
CGCGTCGAGC GCCTCGAGGC CAGCGCTGCT GAGTGGTCCG AGAAGTACGG CATCGAGGTT
CTTCCTTGCG CATGCGACGT TACCGACGAG GCTTCCATCC AGGCTGCCAT CGATGCTGCC
GACGCCAAGT TCGGCCACAT TGAGGTTCTC GTAAACTCCG CCGGCGGCGA GAAGGGCACT
GGCACCAAGA TCGTCGACTT CCAGCGCAGC GACTGGGACT TCACTATGAA CCTGGACCTG
ACCTCCATCT TCAGCATGTG CAAGATGGTC GGTGGCTACA TGCAGAAGAA CATCGAGGCT
GGCAAGCAGA CCTATGGCCG CATCATCAAC ATCGCTTCCA TCTATGGTCT GGTTGGCAAC
ACTGCACTGC CCACATGCGC TTATCACGCA TCCAAGGGCG CTGTCGTGAA CTTCACCCGT
GCTGCCGCCG CTGAGTTCGC TCCCACCGGC ATCACCGTGA ACGCCATCTG CCCCGGCTAC
TTCTACACCG AGCTGACCAC CGAGACCCTG GACACCGAGT ACTTCCAGAA CTTCGCCAAG
TCCACCGTTC CCATGCAGCG CTACGGCCAG GCCGGCGAGC TCTGCGCAGC CGCCCTGTTC
CTGGGTGCCG AAGAGGCCTC CTACGTCACC GGCCAGATGC TCGCCGTTGA CGGCGGCTAC
ACCTGCGTGT AG
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| Protein sequence | MAYFDFSGKV VAVTGASSGL GKQMAEGYAQ QGANLVLLAR RVERLEASAA EWSEKYGIEV
LPCACDVTDE ASIQAAIDAA DAKFGHIEVL VNSAGGEKGT GTKIVDFQRS DWDFTMNLDL
TSIFSMCKMV GGYMQKNIEA GKQTYGRIIN IASIYGLVGN TALPTCAYHA SKGAVVNFTR
AAAAEFAPTG ITVNAICPGY FYTELTTETL DTEYFQNFAK STVPMQRYGQ AGELCAAALF
LGAEEASYVT GQMLAVDGGY TCV
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