Gene Shel_12220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_12220 
Symbol 
ID8395113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1404819 
End bp1405211 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content63% 
IMG OID644985979 
ProductHIT family hydrolase, diadenosine tetraphosphate hydrolase 
Protein accessionYP_003143599 
Protein GI257063927 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGACG AGAACTGCAT TTTCTGTAAG ATAGCCAAGG GCGAGGTGCC CACGAGCAAG 
GTCTACGAGG ACGATACGTG CATCGTGTTC GACGACAACG ACCCGCTGAT GCCCGTGCAT
ACGCTGATCA TCCCCAAGGA CCACTACGCC AACATCGGCG ACGGCGTGCC CGAGGAAACG
CTGGGCCATG TGTTCGGCCT GGTCGGCAAG ATCGCCGAGA TGAAGGGCGT GACCGAGGGC
GGCTACCGCG TGCTGGTGAA CACCGGCGAC GATGCCAGCC AGAGCGTGAA GCATCTGCAC
GTGCACATCC TGGGCGGCGG GCACATGCCG CGTCCCAACG ACCAGGACTG GGGCCCCGCT
GCCACCAACG CCGCCAAGTA CGGCTACTGC TAA
 
Protein sequence
MQDENCIFCK IAKGEVPTSK VYEDDTCIVF DDNDPLMPVH TLIIPKDHYA NIGDGVPEET 
LGHVFGLVGK IAEMKGVTEG GYRVLVNTGD DASQSVKHLH VHILGGGHMP RPNDQDWGPA
ATNAAKYGYC