Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_11180 |
Symbol | |
ID | 8395009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 1274549 |
End bp | 1275475 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644985876 |
Product | lysophospholipase |
Protein accession | YP_003143502 |
Protein GI | 257063830 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.529406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCACG AAGTCAAGTT CCCGTCTTTC AACAACCGTG ACGAAGTGAC CGGCTGGATC TATGTGCCGG CCTGCGAGCC CGAAGGCGTG GTGCAGCTGG TGCACGGCTT CGGCGAGCAC TCGCGCCGCT ACTTCCATAT GATCGTGGCG CTTATGGACG CGGGCTTCAT CGTCGCGGCC AACGACCATG TGGGCCACGG AGCCACGGCC ATCGCCAACG ACACCTGGGG CGACTGGGGC GACGCAGGTC CGCACACCAT GATGGAGGAC GAGAAGCGCT TCAAGGATGT GGTCTGCAAA AAGTATCCTG ACCTGCCGTA TTTCATGTTC GGGCACTCCA TGGGCTCCAT GATCGCGCGC GATTTCTCGA CCAAGTACGG CGACGAGCTG ATGGGCGTCA TCTACTGCGG CACCACGGGC GTGTTCGCGA ATACCCGCGC CGTGCGCGAG AAAGTGGACG CGGCCGTCGC CGCAGGCAAG GCCCACGAGG CCGACCCGGC GTTCGTCGGC GAGCTGTTCG GCTGGATGTT CAGTCGCTGC GACGAAGGCG TCAAGCTGGG CAACGAGTGG ATCTGCCACG ACCCCTACGT GCAGAAGGAC CACGCCGAAG ACCCCTTCGA CGCGTTCACA CACCCGTGCC ACAACATCTC GGTTCGCGAC TTTATCGACA TGATGCTGTG CATCGAGGGT AAGGAATGGG CCGAGAAGGT GCCGACCGAC CTGCCCATCC TGCTGATCGC CGGCGACCAG GATCCCGTGG GCAATTTCGG CGAGGGCGTC TATACCTGCG CGAATTGGCT TATCGACACG GGCCACGACG TCATCACGCA GCTGTATCCG GGCTTCCGCC ACGAGATCCA CAACTACGAC GAGATCAAGT TCGACGTGGA AACCACCCTG GTCGAGTGGC TGACCATGCA GCTGTAG
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Protein sequence | MLHEVKFPSF NNRDEVTGWI YVPACEPEGV VQLVHGFGEH SRRYFHMIVA LMDAGFIVAA NDHVGHGATA IANDTWGDWG DAGPHTMMED EKRFKDVVCK KYPDLPYFMF GHSMGSMIAR DFSTKYGDEL MGVIYCGTTG VFANTRAVRE KVDAAVAAGK AHEADPAFVG ELFGWMFSRC DEGVKLGNEW ICHDPYVQKD HAEDPFDAFT HPCHNISVRD FIDMMLCIEG KEWAEKVPTD LPILLIAGDQ DPVGNFGEGV YTCANWLIDT GHDVITQLYP GFRHEIHNYD EIKFDVETTL VEWLTMQL
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