Gene Shel_11040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_11040 
Symbol 
ID8394995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp1258920 
End bp1259843 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content63% 
IMG OID644985862 
Producthypothetical protein 
Protein accessionYP_003143488 
Protein GI257063816 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000299732 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCACGAGG AGGGATGCGC TTTGCCTGGC GAACCGAGCA TTCAGATGGG GTCCTATCAC 
GAGGGGTTCC CGACCATCCA CATCGTCAGC GACTCGCTTG GCTTCACGGC CCAATCGCTG
GCCAGGGCGG CGGCCGGCCA GTTCGGCGTC ACCGACCCCG CCTTCGAAAT CTTCTCCAGG
ATCACCGATG CCGAAACCGC AGGCAAGGTC CTGCTGAAAC ACCGCGCCGA GCAGGCCAAC
AACGGCATAA ACGAGCCCAT GGTGGTGTTC TTCTCGTTCG TCGACGCCGA GGAGAGCGCC
AAGCTGAAGA GAATCTGCGA GAAGCACGAC ATCTATGCGG TCGACATGAT GACCGAGCCG
ATCGCCATGC TCGAAAAGGC GTCGGGCCTC ACGTCGTCCC GCCAGCCTGG CCTGTTCCGC
CAGACCGACG AGAACTACTT CAGGCGCATC GCCGCCATGG AATTCACCAT CAACCACGAC
GACGGACGCA ACTACCAGGA CCTTCCCAAA GCCGACATCG TGCTTCTGGG CGTCTCCCGC
TCGTCGAAGA CCCCCATCTC CGTGTACATG GGAATGGAAG GTTACCGCGT GGCCAACGTG
CCGCTGGCCG TGGGCACCGA GCCGCCCGCT GAGGTGTTCG AATGCGACCC CACGCGCATC
TTCGGTCTTA TGACCACCCC CGACGTGCTG GTCAGCATCC GCCAGCGCCG CCTGGGCAAC
GCCGGCAAGG GCGCGACGGG CGCCGCCGGG CAGTACGCCC AGAGGGATTA CGTCTACGAT
GACCTGGAAT CGGCCCGCGC CCTCATGCGC AAACTGGGCT GTATCGTCAT CCACACCGAA
AACAAGGCCG TCGAAGAGAC CGCACAGGAA ATATTGCGAT ACTATGAACT GACTCACCCA
GCGCGCAAGC CGCCTATTGA GTGA
 
Protein sequence
MHEEGCALPG EPSIQMGSYH EGFPTIHIVS DSLGFTAQSL ARAAAGQFGV TDPAFEIFSR 
ITDAETAGKV LLKHRAEQAN NGINEPMVVF FSFVDAEESA KLKRICEKHD IYAVDMMTEP
IAMLEKASGL TSSRQPGLFR QTDENYFRRI AAMEFTINHD DGRNYQDLPK ADIVLLGVSR
SSKTPISVYM GMEGYRVANV PLAVGTEPPA EVFECDPTRI FGLMTTPDVL VSIRQRRLGN
AGKGATGAAG QYAQRDYVYD DLESARALMR KLGCIVIHTE NKAVEETAQE ILRYYELTHP
ARKPPIE