Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_10930 |
Symbol | |
ID | 8394984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | - |
Start bp | 1248400 |
End bp | 1249617 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644985851 |
Product | bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities |
Protein accession | YP_003143477 |
Protein GI | 257063805 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.34112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000328438 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGTACGATT TTGACGAAGT CATCGACAGG CAAGGTACGG ATGCCTTGAA CACGGATGGC TTCCGCGGAT ACATCTTCCA TGCGGGACCT GAAAAGGTGT TCCCCTACGC CGACGACGAG TTCGTCCGGA TGTGGGTGGC CGACATGGAG TTCGGCATCG CCCCGGAAAT CCTGGACGCG CTGCGCGCTC GTATCGACCG CCGCATTTTC GGATACACCG TCGTGAACGA CGCCGAGTAC TACCAGCTGT TCCGTTCGTG GTGCCTGGAC CACTACGATT GGGACTTCCC CCAGGAACAG CTGTGCTACA GCCCCGGCAT CATCCCGGCC CTCTTCCAGC TCACGGAGTC ACTCGTCGGG CCGAAAGAGA AAGTCCTCAT GTGCACCCCT GCGTACGGAT ATTTCCTGCA TGCGGCGGAA TACGGCCATG TGGAGCCCGT GCGCTGCCCG CTGAACATCG ACGAGCAGGG GCGTTTCACC GTCGACTACG AAGCGCTCGA TTCGATGTGC GCCGACCCGT GGGTGAAGCT TATATATTGG TGCAACCCGC ACAACCCCTC CGGCCGCGTC TGGACGCAGG AGGAACTCGA GAAGGTGGCG CGCATCATCG AGAAGCACGG CATCTGGATC GTCTCCGACG AGATTCATTG CGACATCCTC CGCCAGGGCA AACAGCACAT TCCCATGGGA AAGGTCATGC AGGATTATCC GAAGCTTATC ACCTGCATGG CACCGACCAA GACGTTCAAC ATGGCCGGTC TGTCGTTCTC CAACATCATC ATCCGGGACA AGACCCTGCG CGAAACCTTC CGCAACCGCG ACAAGCTGGA CGGCATGTAC AACGCCATGG CGGTAACCGC AGCCAAGGCC GCCTACACGT ATGGCGAGCC GTGGCGCCGG GAGCTGTTGG CGTATCTGGA CGAGAACTTC GCATTCACGA AGCAATTCCT GGAAAACGAG CTGCCTGAGG CGGTCATGAA CATATCCGAG GCGACGTACC TGGCCTGGGT CGACATGTCC AAGTGCCTGC CGGACGTAGA CGACCTGCCG GACTTCTTCG CAAACGAGGC AGGCGTGCTT CTCGAAGGCG GGAACGACCT GTTCGTAGGT AATGCGGACG GCTATATTCG GCTCAATCTG GCAATGCCCC GATCCATCAT CAAAACCGGC CTCGAGCGAA TGAGGGATGC CATCGTCGCG CATAGTGCCG AACAATAA
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Protein sequence | MYDFDEVIDR QGTDALNTDG FRGYIFHAGP EKVFPYADDE FVRMWVADME FGIAPEILDA LRARIDRRIF GYTVVNDAEY YQLFRSWCLD HYDWDFPQEQ LCYSPGIIPA LFQLTESLVG PKEKVLMCTP AYGYFLHAAE YGHVEPVRCP LNIDEQGRFT VDYEALDSMC ADPWVKLIYW CNPHNPSGRV WTQEELEKVA RIIEKHGIWI VSDEIHCDIL RQGKQHIPMG KVMQDYPKLI TCMAPTKTFN MAGLSFSNII IRDKTLRETF RNRDKLDGMY NAMAVTAAKA AYTYGEPWRR ELLAYLDENF AFTKQFLENE LPEAVMNISE ATYLAWVDMS KCLPDVDDLP DFFANEAGVL LEGGNDLFVG NADGYIRLNL AMPRSIIKTG LERMRDAIVA HSAEQ
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