| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_09040 |
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| Symbol | |
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| ID | 8394795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | + |
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| Start bp | 1046741 |
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| End bp | 1047688 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644985663 |
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| Product | transketolase subunit B |
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| Protein accession | YP_003143297 |
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| Protein GI | 257063625 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3958] Transketolase, C-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.28283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0525296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTAACG AGAAGAAGGC CACCCGTGCC GCTTACGGTG CGACCCTTAT CGAGCTGGCC
CAGGCGGGGC TGCCTGTCGT TGCCGTGGAC GCCGACCTTA CCGGCTCCAC CACAACCAAG
AAATTCGGCG ACGTCTATCC CGACCGCCTG TTCAATGTGG GCATCGCCGA GCAGAACATG
ATCGACGTGG CCGCCGGCCT GTCCCTCACT GGAAACATCG CCTACACCGG TTCGTTCGCC
GTGTTCGGCA CGGGCCGCGT GTACGATCAG ATCCGCAATA CGGTCTGCTA CTCCAACCTC
AACGTGAAGA TCGCCCCGAC CCATGCCGGC GTCTCCGTCG GTCCTGACGG CGGCAGCCAT
CAGATGATCG AGGACATCGC CCTTATGAGG GTCCTGCCCA ACATGAAGGT GCTTGTTCCC
GCCGACTACG AAGCCGCCCG GGCGGCCCTT AAGGTTGCAG CCGAAACCCC CGGCCCCGTG
TACATCCGCA TGGGCCGCGC TTCGGTTCCC TGCGTGTACG AAGAGGGCAA GGAGCTCGAG
ATGGGCCGCG CCTACGTGCT GCGCGAAGGC ACCGACGTGA CCATCGTCGC ATGCGGCGTC
GAGATCAACG AGGCGCTGAT CGCCGCCGAC CAGCTTGCCG AAGCGGGCAT TTCCGCCGAA
GTCATCGACG CGTTCTGCGT CAAGCCCCTC GACGAGCAGA CCATCCTGGC GTCTGTCGCC
AAGACCGGAT GCGTTGTGAC CGCTGAAGAG CACTCCGTCA TCGGAGGCCT TGGCGGAGCC
GTGGCGGAGC TGCTGGCCGA GACGACCCCG GTGCCGATGT ACCGCATCGG CATGCGCGAC
GTGTTCGGCA CCTCCGGCGA GTTCGAAGAG CTTATGGCCG CTTTCAAGCT GGACGCCGCC
GCCATCACAG AAGCTGCAAA GAGCGTTATT TCTCGCAAAA ACGCCTAG
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| Protein sequence | MSNEKKATRA AYGATLIELA QAGLPVVAVD ADLTGSTTTK KFGDVYPDRL FNVGIAEQNM
IDVAAGLSLT GNIAYTGSFA VFGTGRVYDQ IRNTVCYSNL NVKIAPTHAG VSVGPDGGSH
QMIEDIALMR VLPNMKVLVP ADYEAARAAL KVAAETPGPV YIRMGRASVP CVYEEGKELE
MGRAYVLREG TDVTIVACGV EINEALIAAD QLAEAGISAE VIDAFCVKPL DEQTILASVA
KTGCVVTAEE HSVIGGLGGA VAELLAETTP VPMYRIGMRD VFGTSGEFEE LMAAFKLDAA
AITEAAKSVI SRKNA
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