| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_07420 |
|---|
| Symbol | |
|---|
| ID | 8394633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 864254 |
|---|
| End bp | 864850 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644985502 |
|---|
| Product | predicted metal-dependent hydrolase |
|---|
| Protein accession | YP_003143148 |
|---|
| Protein GI | 257063476 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1451] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.654381 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCGAC GCAGCGGCAT AGCGGCGAAA ACCAAACGCA CCACCTTGAT CGTCGACGGC
GTCGACGTTC AGGTGGTGCG TCGCTTTGGC CAGAAGAGCG CCCGTCTGAA GGTGAAACCG
CCCGACGGGC ATCTGGAAGT GACCGGTCCC TTCGCCATGA CAGACCGGGA GATCAGCACC
TTCGTGCAAA GCCACTGGGA TTGGATCGCC CGGCAGAAGC TTCAAACCAT TGCCATGGAG
GAGGCCAAAG GCGGCACGCC CACCCAGGCC GAGCTGGATG CATGGCGGGA ATGCGTCAAG
GCCTTCGTGC CGCCCTTGAT TGACAAATGG GCGCCGGTCA TGGGCGTGCG TCCCGGCAAG
GTGACCTACC GCAACATGGT CAGCCGATGG GGCAGCTGCA ACGTGAAGTC CGGCCACATC
ACCATCAACA TACAGCTGGC CGCGCAGCCG CCTGATTGTC TGGAATACGT GGTGGTCCAC
GAGCTGTGCC ACCTGCTGGA GCCCAGTCAC AACGCCCGGT TCCACGCGCT CATGACGCAG
TTTCTGCCCA CTTGGAAGCA AAGCGAGCGC AAGCTCAGGG GCGCCATCCG CCGTTAG
|
|---|
| Protein sequence | MARRSGIAAK TKRTTLIVDG VDVQVVRRFG QKSARLKVKP PDGHLEVTGP FAMTDREIST
FVQSHWDWIA RQKLQTIAME EAKGGTPTQA ELDAWRECVK AFVPPLIDKW APVMGVRPGK
VTYRNMVSRW GSCNVKSGHI TINIQLAAQP PDCLEYVVVH ELCHLLEPSH NARFHALMTQ
FLPTWKQSER KLRGAIRR
|
|---|
| |