| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_04120 |
|---|
| Symbol | |
|---|
| ID | 8394304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 490827 |
|---|
| End bp | 491414 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644985176 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003142822 |
|---|
| Protein GI | 257063150 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.453544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.455959 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAC GACCTGACAA AACTGCGCAA ACCAAAGCCG AGTTCCGCGA AGCGTTCCTG
CAGCTGTACG CGACGACGCC CATCAACAAG ATGACCGTGG GGCAGGTCTG CGAGCGCGCC
GGCTACAACC GCGGTACCTT CTATCTGCAC TATCAGGACC TGTACGATGT ACTGGAGCAG
ATCGAGAACG ACCTGCTCGA CGGCATGACG GCCTGTGTCG AAGCCTGTAT GAAGCGCCTG
AGCCAGGACT CGAGCAAGCT CAGCTGCATC GCCGCTTGCG CCGACGTGGT GGCTTACTAC
GAGCGCAACA AGGACAGCAT CGCCATCCTT CTCGGCGAAA ATGGCGACCC GGCTTTCGTC
CACCGTTTGA AGAACAACCT GAAGCCCCTG TGGCGCACTT ACGTTGTGGG CGAGTCGGCG
GAGCGCTCCG AAGCCGAACT GGACCTGGCG CTCGAGTTTG CCCTGACAGG GACGCTGTAT
ATGATTTCTG AATGGCTGTC CGATTCGCGC GGCGTGTCCG CCTACCGGCT GGCGCACCTG
GTCTACGACT TCTCCATTCG TGACGTGCGC CGACGCTCGG AGCTGTAG
|
|---|
| Protein sequence | MRKRPDKTAQ TKAEFREAFL QLYATTPINK MTVGQVCERA GYNRGTFYLH YQDLYDVLEQ
IENDLLDGMT ACVEACMKRL SQDSSKLSCI AACADVVAYY ERNKDSIAIL LGENGDPAFV
HRLKNNLKPL WRTYVVGESA ERSEAELDLA LEFALTGTLY MISEWLSDSR GVSAYRLAHL
VYDFSIRDVR RRSEL
|
|---|
| |