| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_03940 |
|---|
| Symbol | |
|---|
| ID | 8394286 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Slackia heliotrinireducens DSM 20476 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013165 |
|---|
| Strand | + |
|---|
| Start bp | 468255 |
|---|
| End bp | 469295 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644985158 |
|---|
| Product | Transglutaminase-like superfamily protein |
|---|
| Protein accession | YP_003142804 |
|---|
| Protein GI | 257063132 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG5279] Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.474674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.582976 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCCAG AGTACGTAAA GTTCTATCAT GACAAACTGC CTGATTGGAT GCGCCCCATC
TACGAGCGCA TCTATTGGTC CGTGCGGAAT CAGGACGAAG CCGTCATCGT GGACGACCCG
GAGCGCAAGC TTGACATCGA CCAGCTGCTT TACCTCCAGG AATGCATCTA CTACGACTGC
CCGGCGTTTT ATTATTGGCG CTACGCCAAG GCCACGATCT TCACCTTTGC CAAGGGCAAC
AAGCACCAGA TCAAGCTGAC GTATTGGTAC ACGCCGGAGA AGCGCGCGCA TTTCGACAGG
CGGCTGAGCG CGGTTGTGCA GCGGTTCCTG AATGACCATA TCGCATCCGG TATGACGCAA
TACAAGCGTG AACTGGCCAT TCACGATTAT CTGGTGCAGA CCGTGACCTA TGACACCGAG
GCCTTGGCGG TCAACAACGA CCCGACCAAC CCTCGACATC ACGACGAAAT CTACAGCGTG
CTTGGGGCGC TGCTTAAGCG GAAGGCGGTG TGCGCGGGCA TATCCAGCGG GTTCAAACTG
CTGTGCGACG CGGCGCGAAT CAAATGCTTT GTGGTGGTGG GAAGCTCGAC GCATGAGTCG
GACGCGGGGG AGCGTCACGC CTGGAACATG GTCAAGCTCG ACGGCGAGAC GTATCACGTG
GATGCCACTT GGGACATACG CGACGCGGGG GACATCCGCA TGTGCTACGA CTACCTGAAT
CTGACAGACG GCCTGATCCG GTTCGATCAC ACCTGGTCAA GTACCATTTA TCCTGCTTGC
ACGGCGCTCG AGTACAACTA TTACCACCGC GGGCGCTACT TCGTGACCAA GCTGGACCGG
GTGGGGAAAT ACGTGCGGAA GCACCTCGCG GCGGGCGAAC GGTACCTGGC TTTCAAATTC
GCCAATGACG CCATGGCACC CGACGACGCG ATTGCCGCCG AAATCAAGAA GGGCATCCGT
GCGGCTCGCG TCTCGTGCAC CTACGATTAC TATATCTCTC AGGAGACGCA TAACATCTAC
CTGCGCATAC GTGAGATCTA G
|
|---|
| Protein sequence | MLPEYVKFYH DKLPDWMRPI YERIYWSVRN QDEAVIVDDP ERKLDIDQLL YLQECIYYDC
PAFYYWRYAK ATIFTFAKGN KHQIKLTYWY TPEKRAHFDR RLSAVVQRFL NDHIASGMTQ
YKRELAIHDY LVQTVTYDTE ALAVNNDPTN PRHHDEIYSV LGALLKRKAV CAGISSGFKL
LCDAARIKCF VVVGSSTHES DAGERHAWNM VKLDGETYHV DATWDIRDAG DIRMCYDYLN
LTDGLIRFDH TWSSTIYPAC TALEYNYYHR GRYFVTKLDR VGKYVRKHLA AGERYLAFKF
ANDAMAPDDA IAAEIKKGIR AARVSCTYDY YISQETHNIY LRIREI
|
|---|
| |