Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shel_03070 |
Symbol | |
ID | 8394199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Slackia heliotrinireducens DSM 20476 |
Kingdom | Bacteria |
Replicon accession | NC_013165 |
Strand | + |
Start bp | 375071 |
End bp | 376012 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644985078 |
Product | membrane protease subunit, stomatin/prohibitin |
Protein accession | YP_003142724 |
Protein GI | 257063052 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGGGA AAAAAGAGCA CCTAAAAAAG TCGGAAGGCC AGATTTCGGA AGTGCCAGGT ATTGATGATA ACGAATCGAT TTACGATACT ACGAGTAATA AACGGGCATC TCGCGCGGGT GTGTATGGAT TTGCAGTCCT GGTATTCGCT ATTTCTTTTC TAATTGTATT TGCCGTTCTG TTCCCCGTGC TTCAGGCTTA TGCCGTATTA GCTGCCGCAG TAGTAGGCTT GCTGTGCTCG TTCACATTTC GTGTTGCACC ACAATGGGAA CGAGCCGTGT TATTGCGCAT GGGGAAATTT CATAAGGTTG CAGGACCTGG TTTGTATGTC GTCATTCCGC TTGTCGATTC GATAGCGATG TTTGTCGACC AGCGAATGAT AACGTCTTCA TTTGTCGCGG AGCAAGCCCT GACTGCTGAT CTGGTAAGCG TAGATATGGA CGCCGTACTG TATTGGATGG TTTTCGATTC TCGCAAGGCA TGTATGGAGG TAGCCAACTT TCCTCAAGCC GTAATGCGGA GTGCACAGGC GGCTATTCGT GATGCGGTGG GTCAGGTGAC TCTCGCTGAG CTTTCCGTGC GCCGTTGTCA ACTCGACCAC GAGTTGGAAG AATTCATGGC GGATAAATGT GAAGAGTGGG GCATCAGCGT TCTTTCCGTG GCGATTCGCG ATATCCGCAT ACCGAAGGAC CTGCAGCAGT CGCTTGCACG GGAGGCACAG GCTGAGCGTG AGCGCGATGC TCGCGTGCTG TTGGCTGAAG TGGAGCGCGA CATTTCTGAG ATGTACGTGG AGGCTGCACG CGTATACAAC CAAGAAGAAG GCGCCATGGA ACTGCGTGCC ATGAATCTGA GCTATGAAAG TGCCCGTGAT GGCAAGGGAG TGCTCATTGC GCCGAGTAGT TTGGCTGACG GCTTTGTTGA AAAAAGCCGG CTGAAGGGCT AA
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Protein sequence | MIGKKEHLKK SEGQISEVPG IDDNESIYDT TSNKRASRAG VYGFAVLVFA ISFLIVFAVL FPVLQAYAVL AAAVVGLLCS FTFRVAPQWE RAVLLRMGKF HKVAGPGLYV VIPLVDSIAM FVDQRMITSS FVAEQALTAD LVSVDMDAVL YWMVFDSRKA CMEVANFPQA VMRSAQAAIR DAVGQVTLAE LSVRRCQLDH ELEEFMADKC EEWGISVLSV AIRDIRIPKD LQQSLAREAQ AERERDARVL LAEVERDISE MYVEAARVYN QEEGAMELRA MNLSYESARD GKGVLIAPSS LADGFVEKSR LKG
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