Gene Shel_02140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShel_02140 
Symbol 
ID8394106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSlackia heliotrinireducens DSM 20476 
KingdomBacteria 
Replicon accessionNC_013165 
Strand
Start bp264521 
End bp265339 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content66% 
IMG OID644984986 
ProductABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
Protein accessionYP_003142633 
Protein GI257062961 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAGC CAGTTGCAAC CGAATCCCAT GTCATGCCGA AGCTGGACAT GCGCGGCGTG 
CGGCAGACGT ATGCCGGCGT CCACGGCGAT GTGATGGCGC TTGAGGACAT GAACCTGTCC
GTGGCGCCCG GCGAGGCCGT CGCCATCCTT GGGCCATCGG GCTGCGGCAA ATCCACAAGC
CTGTTGCTCG CCGCCGGCCT GCGGAAGCCT TCGGCCGGCT CGATCCTCGT GGATAATGAG
CCCGTCGCGG GCCCACGGCT CAAGACGTCC CTCATCCTGC AGGATTTCGG CCTGATGCCC
TGGAAGACCG TGGAGCAGAA CGCTGGACTG GGCCTGCAGA TCCGCAAGGT TCCCAAATCC
GAGCGCAAGT ATCGTGTGGC CCGCGCCCTT GAGCAGGTGG GGCTTCAGGA TTTCGCGTCG
TCGTACCCGG CGGAGCTTTC TGGCGGCATG CGCCAGCGTC TGGCCATGGC CCGCGCGCTT
ACCTGCGAGA CGGACCTGCT GCTCATGGAC GAGCCGCTGT CCGCCTTGGA CGCCTTGCTG
CGCGAGGAGA TGCAGGACAT GCTGAAGCGC ACGTGGCAGG CGGCGGGATA TGCCCAGGTC
CTGGTCACAC ACTCCATCGA AGAGGCCGTG TATCTGGGGG AGCGGGTGTT CGTGATGACG
CCGCGCCCCG GACGTTTGGC CTACACACTG GACAACCCCG AGATGCATGC CGACGATTGG
CGCAGCGACC CGCTCTTCTT CGAGCGGTGC CGCGATCTGC GCGAGGTGCT GACCAGCAGT
GTCGCGAAGG CCGCCGAAAG CGAGGCCGTC CATGCGTAG
 
Protein sequence
MTEPVATESH VMPKLDMRGV RQTYAGVHGD VMALEDMNLS VAPGEAVAIL GPSGCGKSTS 
LLLAAGLRKP SAGSILVDNE PVAGPRLKTS LILQDFGLMP WKTVEQNAGL GLQIRKVPKS
ERKYRVARAL EQVGLQDFAS SYPAELSGGM RQRLAMARAL TCETDLLLMD EPLSALDALL
REEMQDMLKR TWQAAGYAQV LVTHSIEEAV YLGERVFVMT PRPGRLAYTL DNPEMHADDW
RSDPLFFERC RDLREVLTSS VAKAAESEAV HA