Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_4074 |
Symbol | |
ID | 4457563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4954487 |
End bp | 4955800 |
Gene Length | 1314 bp |
Protein Length | 437 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639704844 |
Product | phenylacetate-CoA ligase |
Protein accession | YP_848174 |
Protein GI | 116751487 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1541] Coenzyme F390 synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.073347 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGTTT GGGAACCCGA AAAGGAACGC ATGTCCAGAG ACGAGCTGGA ACAGCTCCAG CTCGAGCGCT TGCAGGCCAC CTTGAACCGC GTGTATCGAA ACGTGTCTTT TTACAGGCGC CGTTTCAAGG AGATCGACTT CAGGCCGGAG GACGACCTCA CGGAACTCAA GGACCTCGAG CGACTGCCCT ATACCACCAG CCAGGATGTG AGCGACAGTT ACCCCTACGA CATGTTTGCC GTGCCGTTGC GTGAAGTGGT GCGGGTGCAT TCGTCGTCGG GCACCATGGC GAACCCGCGG GTTGTGGGGT ACACGCGCCA GGATCTGCGC ACCTGGAGCG GCCTGGTGGC GCGTATCCTG AGCGCCGGCG GCGTCACCCA GGATGACGTG ATCCAGGTGC TGTTCGCCTA CGGGCTTCTC ACCGGCGGCC TCGGGATTCA CTACGGCGCG GAGCGCATCG GAGCCTCCGT GCTGCCGACG TCCGTGGGCC GGACCGAGAG GCAGATCAAG ATCATGCAGG ATTTCCGGAC CACGGTGCTC GCGTCCACCC CGTCTTACTG CCTGGTCATC GCGGACAAGA TGGCGGAACT GAAGTTCGAT CCGAAGAAGC TCTCGCTCAA GTACTGCATT TGCGCCGGGG AGCCCTGGAC CGAATCCATG CGCGGGGAGA TCGAGGAAAG GCTCTTCGTC AAGGCGACGG ACAATTATGG AATCAGTGAA GTCATGGGTC CGGGGGTCGC CGGGGAATGC CTGGAGGGTC GCAGCGGCAT GCATCTCCAG GAAGACCACT TCTATGCCGA GATCATCGAT CCGGCGTCGG GGAGGGTGCT TTCACCCGGC GAAGAGGGGG AGCTTGTCGT CACGACCCTC ACCAAGGAAG CCTTCCCCGT CATCCGCTAT CGCACGGGAG ACGTCTGCCG CATCATCGAT GAACCGTGCC CGTGCGGGCG CACTTTCCGG AAGATCAGCC GGATTCTCGA ACGCTGCGAC AATGTGGTGG TCATCAAGGG GATCAACATC ATCCCCGAGC GCATCGGCGA CGTGCTCGAA CAGATCAAGG GCGAACGCCC CCTCTATCAG ATCGTGGCGG TCCGGCACGC ACACCGGGAC CGGCTCGAGA TCTGGGTCGA GGTCACCGAA CGGTTCTTCT ACGACAAGAT GCTCGAACAG CGTGCCCTGG TGGATATCAT GAGCAAGACG GTGACCAACC ACTTCGGTAT CACGCCCCGC GTCAAGCTGG TTGAAAGGGG TTCGCTGGAG CGGGAAAACG GTAAGGTCAA GCTGTTTGTG GACCGAAGAA ACATGAAATC ATGA
|
Protein sequence | MPVWEPEKER MSRDELEQLQ LERLQATLNR VYRNVSFYRR RFKEIDFRPE DDLTELKDLE RLPYTTSQDV SDSYPYDMFA VPLREVVRVH SSSGTMANPR VVGYTRQDLR TWSGLVARIL SAGGVTQDDV IQVLFAYGLL TGGLGIHYGA ERIGASVLPT SVGRTERQIK IMQDFRTTVL ASTPSYCLVI ADKMAELKFD PKKLSLKYCI CAGEPWTESM RGEIEERLFV KATDNYGISE VMGPGVAGEC LEGRSGMHLQ EDHFYAEIID PASGRVLSPG EEGELVVTTL TKEAFPVIRY RTGDVCRIID EPCPCGRTFR KISRILERCD NVVVIKGINI IPERIGDVLE QIKGERPLYQ IVAVRHAHRD RLEIWVEVTE RFFYDKMLEQ RALVDIMSKT VTNHFGITPR VKLVERGSLE RENGKVKLFV DRRNMKS
|
| |