Gene Sfum_4074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4074 
Symbol 
ID4457563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4954487 
End bp4955800 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content61% 
IMG OID639704844 
Productphenylacetate-CoA ligase 
Protein accessionYP_848174 
Protein GI116751487 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.073347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGTTT GGGAACCCGA AAAGGAACGC ATGTCCAGAG ACGAGCTGGA ACAGCTCCAG 
CTCGAGCGCT TGCAGGCCAC CTTGAACCGC GTGTATCGAA ACGTGTCTTT TTACAGGCGC
CGTTTCAAGG AGATCGACTT CAGGCCGGAG GACGACCTCA CGGAACTCAA GGACCTCGAG
CGACTGCCCT ATACCACCAG CCAGGATGTG AGCGACAGTT ACCCCTACGA CATGTTTGCC
GTGCCGTTGC GTGAAGTGGT GCGGGTGCAT TCGTCGTCGG GCACCATGGC GAACCCGCGG
GTTGTGGGGT ACACGCGCCA GGATCTGCGC ACCTGGAGCG GCCTGGTGGC GCGTATCCTG
AGCGCCGGCG GCGTCACCCA GGATGACGTG ATCCAGGTGC TGTTCGCCTA CGGGCTTCTC
ACCGGCGGCC TCGGGATTCA CTACGGCGCG GAGCGCATCG GAGCCTCCGT GCTGCCGACG
TCCGTGGGCC GGACCGAGAG GCAGATCAAG ATCATGCAGG ATTTCCGGAC CACGGTGCTC
GCGTCCACCC CGTCTTACTG CCTGGTCATC GCGGACAAGA TGGCGGAACT GAAGTTCGAT
CCGAAGAAGC TCTCGCTCAA GTACTGCATT TGCGCCGGGG AGCCCTGGAC CGAATCCATG
CGCGGGGAGA TCGAGGAAAG GCTCTTCGTC AAGGCGACGG ACAATTATGG AATCAGTGAA
GTCATGGGTC CGGGGGTCGC CGGGGAATGC CTGGAGGGTC GCAGCGGCAT GCATCTCCAG
GAAGACCACT TCTATGCCGA GATCATCGAT CCGGCGTCGG GGAGGGTGCT TTCACCCGGC
GAAGAGGGGG AGCTTGTCGT CACGACCCTC ACCAAGGAAG CCTTCCCCGT CATCCGCTAT
CGCACGGGAG ACGTCTGCCG CATCATCGAT GAACCGTGCC CGTGCGGGCG CACTTTCCGG
AAGATCAGCC GGATTCTCGA ACGCTGCGAC AATGTGGTGG TCATCAAGGG GATCAACATC
ATCCCCGAGC GCATCGGCGA CGTGCTCGAA CAGATCAAGG GCGAACGCCC CCTCTATCAG
ATCGTGGCGG TCCGGCACGC ACACCGGGAC CGGCTCGAGA TCTGGGTCGA GGTCACCGAA
CGGTTCTTCT ACGACAAGAT GCTCGAACAG CGTGCCCTGG TGGATATCAT GAGCAAGACG
GTGACCAACC ACTTCGGTAT CACGCCCCGC GTCAAGCTGG TTGAAAGGGG TTCGCTGGAG
CGGGAAAACG GTAAGGTCAA GCTGTTTGTG GACCGAAGAA ACATGAAATC ATGA
 
Protein sequence
MPVWEPEKER MSRDELEQLQ LERLQATLNR VYRNVSFYRR RFKEIDFRPE DDLTELKDLE 
RLPYTTSQDV SDSYPYDMFA VPLREVVRVH SSSGTMANPR VVGYTRQDLR TWSGLVARIL
SAGGVTQDDV IQVLFAYGLL TGGLGIHYGA ERIGASVLPT SVGRTERQIK IMQDFRTTVL
ASTPSYCLVI ADKMAELKFD PKKLSLKYCI CAGEPWTESM RGEIEERLFV KATDNYGISE
VMGPGVAGEC LEGRSGMHLQ EDHFYAEIID PASGRVLSPG EEGELVVTTL TKEAFPVIRY
RTGDVCRIID EPCPCGRTFR KISRILERCD NVVVIKGINI IPERIGDVLE QIKGERPLYQ
IVAVRHAHRD RLEIWVEVTE RFFYDKMLEQ RALVDIMSKT VTNHFGITPR VKLVERGSLE
RENGKVKLFV DRRNMKS