Gene Sfum_4009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_4009 
Symbol 
ID4457655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4869663 
End bp4870751 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content63% 
IMG OID639704780 
Productradical SAM domain-containing protein 
Protein accessionYP_848110 
Protein GI116751423 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.727225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTGCC GTTCATCTCC CATTCCCGAC GGTGCCGAAC ACCTGCGCAA ACTTGCGCGC 
ATTGCCGTCG AACATCGGAT TCCGCTGTTC GGAGCCTTCG ATCTCACCTA TCGATGCAAT
CTGAATTGCA TTCACTGTTA TCTTGGGCCG CACGATGGAG ACCACGAAAC GCTCGGGCCG
GAAGCGGGCG CCGCCCGGAT TCGCGACTTG TTGCGGCAGG CGGCGGAAGC AGGGTGCCTG
TACGTTCTCC TGTCGGGGGG CGAACCGCTG CTCAGACCCG ATTTCGAGTC GATCTACCGA
TACGCCCGGT CTCTGGGGCT GATCGTCACC GTGTTCACCA ACGCCTGCCT GATCGACGCA
CGGCATATTG AAATCTTCAG GGAGGTTCCC CCGTACCTGG TCGAGGTCAG CGTCTACGGG
GCGACGCGCG GGACCTTCGA GAAAATCACC CGGGTGCCGG GATCCTTTGA ACGGTGTCTG
AGAGGCATCG GCAGACTGGT GGACGGCGGA ATCCGGACGG GTCTCAAGAC GATGATCATG
CGGAGCAACG TGCAGGAGAT CCCCGCCGTG GAAGCGCTGG CGAAGCACTT CGGCACCGGG
TTCCGGTTGG ACCCGGTGGT TTGCCCTCGT TTGGACGGCA CTCCCGCCCC TCTTGTCGAG
CGGGTCGACC CGCGGCGTGC GGTGGAACTG GAACTGGCCG AAAAGGAGAG GATTTCGAGC
TACAGAAAAT ACCTCGAACG CGCCGCGGCG TTGTCGCCTC CGTCGGCATT GTATGAATGC
GGTGCGGGTC GTGCTGCGTT TCACATCGAT CCCGGGGGGG TGCTTCGCCC CTGTCTGATG
GTTCGCTCGC TTGCGTTCGA TGCCCTTGCG GAAGGCTTCA GGGCGGCGCA CGCAAGGGCC
GGGGCGGCGA TCTCCGGGCT GAGAGCGGTC AGAGGACAAC CGTGCTTTGA ATGCGCGAAA
CGTCCGGTGT GCGGATACTG CCCGGGTTTG TTCGAGTTGG AAAACGCCTC GGCGAGCATA
CCGTCGGGAT TTCTGTGCCA GTTGGGAACT CACCGGTTGC AGGTCCTGCA AGGCGATTCG
AGCGCGTAG
 
Protein sequence
MDCRSSPIPD GAEHLRKLAR IAVEHRIPLF GAFDLTYRCN LNCIHCYLGP HDGDHETLGP 
EAGAARIRDL LRQAAEAGCL YVLLSGGEPL LRPDFESIYR YARSLGLIVT VFTNACLIDA
RHIEIFREVP PYLVEVSVYG ATRGTFEKIT RVPGSFERCL RGIGRLVDGG IRTGLKTMIM
RSNVQEIPAV EALAKHFGTG FRLDPVVCPR LDGTPAPLVE RVDPRRAVEL ELAEKERISS
YRKYLERAAA LSPPSALYEC GAGRAAFHID PGGVLRPCLM VRSLAFDALA EGFRAAHARA
GAAISGLRAV RGQPCFECAK RPVCGYCPGL FELENASASI PSGFLCQLGT HRLQVLQGDS
SA