Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3992 |
Symbol | |
ID | 4457671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4845971 |
End bp | 4846666 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639704763 |
Product | response regulator receiver/unknown domain-containing protein |
Protein accession | YP_848094 |
Protein GI | 116751407 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4565] Response regulator of citrate/malate metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000025564 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACAA AAGAGCCCAT CCGGGTATTG ATCGTTGAGG ACGATTTGCG CATTTCCGAG TTACACCGCC GTTTCACCGA GAAAATCGAC GGGTTCGAGG TCGTAGGGAT AGCGAACACG ATAGCCGACG CGGAGGATAT GGCCGAGGTT CTTGCCCCCG ACCTGGTGCT GCTTGACCTG TTTTTCCCCG AAGGAAACGG GTTGGATTTG CTCCGGAAAC TGAGAGCACG GGCAGTCCCG GCCGACGTGA TTCTTATCAC TGCCGCCCGC GAGATGAACT CGCTAAAGGA AGCAATTCGC GGCGGTGTTT TTGATTATAA TGTTAAGCCT GTCGTCCTGA CTCGCTTCCA AGCATCGATG GAAAGATACC GGGACTACTT CCGCAGCATG AGGGCAGGAG GGTCCCTAGA CCAGAAAGAC ATCGACCGGC TGTTTCACCC CGAAATAGGC AGACGATTCG AAGACCCGGA AATGCCCAAG GGCATTGACC GGCTCACGCT GCGTAAAATC AGGCAGGTAT TTGAATCATC TTCCGACAAA GACTTCAGCG CCGAGGAAGT GGCAGAGCAA ATAGGCCTCA GCCGCTCCAC AGCCCGCAGG TACCTCGAAT ACCTGGTAAG TGAGAGCTTC CTGGCTGCGG ACCTCCTCTA TGGTGTAGTT GGCCGCCCCG AAAGGCGTTA TTTCCGAGTC ACCTGA
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Protein sequence | MATKEPIRVL IVEDDLRISE LHRRFTEKID GFEVVGIANT IADAEDMAEV LAPDLVLLDL FFPEGNGLDL LRKLRARAVP ADVILITAAR EMNSLKEAIR GGVFDYNVKP VVLTRFQASM ERYRDYFRSM RAGGSLDQKD IDRLFHPEIG RRFEDPEMPK GIDRLTLRKI RQVFESSSDK DFSAEEVAEQ IGLSRSTARR YLEYLVSESF LAADLLYGVV GRPERRYFRV T
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