Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3967 |
Symbol | |
ID | 4457716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4820102 |
End bp | 4821562 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639704738 |
Product | fibronectin, type III domain-containing protein |
Protein accession | YP_848069 |
Protein GI | 116751382 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.476574 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.587814 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAA GCAGAGCGTC GTTCGTCCGC ACAACGAAAT TCCGGCGCAT CCGCCGTTTG ACGACTTTCC TGGTTGCCCT CGCGGCCGTC CTCTCGATCG CCCCCGATGC CTTTCCCGCT TCAGTCACCC TCTCCTGGAA TCCCGTGTCG TTCAAGAACC TTCGCGGCTA CAGAATCTAT TGCGGCACGT CGCACCGCAA CTATTCCCGC CGCGTGACGC TGGGCAAGGC GACTTCCGGG ACGGTAACGA ACCTTGTGAA GGGCAGAACC TATTATTTTG CCGTAACCTC CTATGCCGCC GGGGTGGAGA GCGGATTCTC AAAAGAAGTG GTCTTCCCCC CGAATGAGGC ATCGATCCAC GATACGCGCC TCCAGACGGG TGATTCCGGG GATGCGTCAG ACACCCCGGC ATCCGAGGGC GCATTCGAGC TGCAAGTCTT GTCCAGAACC GATCCCCCGG CTCCCGGCGT CAACGATGCG GGAGGCGATT CCGTTGCGGC GCTCGACTCC GGGGGCATGC AACCCCACGA ATCGGTTTAC CTGGAGGCGG AAGCCGGCGC TCTGGAGGTC CCCCTGGAAA CGGGCGTGAC CACGTCCGCC ACCGGTTTTA TCCGGGTGCC CGTCGGGCTT GAGCCCGTTT CGGACCCCCT GCGGGAAGGG GGCACCGCCA CCTATGCATT CACGGTGACC GCCGCCGGAG ACTATACCTT CTGGGGACGC GAATACTGTC CGTACAGCAC CCGCAATTCC TTTTTCGTCT CGGTCGATTC CGGCCCCTTC CTCACCTGGA ACACCGCGAT CGTCAACGGG TGGCTGTGGG ACCAGGTGCG CGACGGGTCC TCCGGTTCCC CGTTGAAACT GCGGCTGGGA GCCGGCGACC ATACGCTCAG GATCAAGCAA AAGGAGGACG GCACGCGCTT GGACAAGATC CTGATCACCA GCGCGCCGCA GCCGTTCCCC TCAACGCTCT ATTGCGCCGT ATCGCGCGGA GTGCCGGGCC GGTGGAGCAT CACCGACCCC GACCCGCCCG GGGCGAAGGT CGTGAGCGTG TTTGACGACG AGCGGGGCGG TCCCGTCACG GAATTGTCCG GCTCCGAAAC GGCCAACGCG TTTCACCTGG GCGGCCGGGA CCTCGACGGT TGGCACAACA CCCGTCAGTT CGTCCTGGAG TGGAGCATGA AGTTCTCCGA GGACTACGTG GTTTCGGTGC ACGTGCAGAC CACGGACGGC TACCGGGAAA TCCGGTACAA GCCTCTTATC GGAAACGGTC CGGGAGACGA CCGGACAATC GATTGCGGGC TTGGGCCCGG CACCCTGGAC GGCGACTGGC ACACCTTCGC CCGCCACCTG CAAAAGGACT TGTCCAGGGC ACAGCCGGGG GTAAAGATCC TCGAAGTGAA TGGATTCTCG GTTCGCGGCA GCGGCAGAAT AGATAACGTG AGGCTCGGGG CCGGCCGTTG A
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Protein sequence | MTESRASFVR TTKFRRIRRL TTFLVALAAV LSIAPDAFPA SVTLSWNPVS FKNLRGYRIY CGTSHRNYSR RVTLGKATSG TVTNLVKGRT YYFAVTSYAA GVESGFSKEV VFPPNEASIH DTRLQTGDSG DASDTPASEG AFELQVLSRT DPPAPGVNDA GGDSVAALDS GGMQPHESVY LEAEAGALEV PLETGVTTSA TGFIRVPVGL EPVSDPLREG GTATYAFTVT AAGDYTFWGR EYCPYSTRNS FFVSVDSGPF LTWNTAIVNG WLWDQVRDGS SGSPLKLRLG AGDHTLRIKQ KEDGTRLDKI LITSAPQPFP STLYCAVSRG VPGRWSITDP DPPGAKVVSV FDDERGGPVT ELSGSETANA FHLGGRDLDG WHNTRQFVLE WSMKFSEDYV VSVHVQTTDG YREIRYKPLI GNGPGDDRTI DCGLGPGTLD GDWHTFARHL QKDLSRAQPG VKILEVNGFS VRGSGRIDNV RLGAGR
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