Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3657 |
Symbol | |
ID | 4458014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4464499 |
End bp | 4465533 |
Gene Length | 1035 bp |
Protein Length | 344 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639704430 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_847762 |
Protein GI | 116751075 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0134519 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAACAC GGAATTCTCC CCCTGACCTG ACGTTCCATG TGGACGTCGA GGAAAAGCTC CGCCGGCTGG ACGTATTCCT CAGCGCCCGG AGCCCGGATT GTTCGCGAAG CCAGGTTCAG AAGCTGATCC GGGAAGGTCG TGTGACCGTG AACGGATTGC CGGTCAAGGC GAGCTATGAA ATCCGATCCG GCGACTGCAT CGCGGTGTGG CTGCCGGAGG CCGTCGGGGA GGATTCGCTG CAGCCTCGGC CCATGCCCCT GGAGATATTG TTCGAGGATG ACGATGTGCT GGTGCTGAAC AAGGCGCCCG GGGTCATCGT GCATCCCGGC GCGGGGCATG AGGAAGGGAC GCTGGTTCAC GGTCTGCTGG CCCATTGTTC CAGGCTGGCT TCCCGGGGCG CTCCCAGAAG GCCCGGCATC GTTCACCGCC TGGACCGCGG CACTTCGGGC GCCTTGATGG TGGCCAAAAG CGAGCGGGCC TACCTCGAGC TGATCCGGCA GTTCAAGCAC CATGAGGTCG GCAAGGAGTA CCTCGCGCTG GTGTACGGCA CGATGGCCGG GGCGTCAGGG GAGATACGGA CGGGAATGGG TCGCCATCCG GTGGATCGGA AAAGAATGGC CGTGCTGGAA AAAGGCGGGC GCGAAGCCGT TTCTCAATGG AAGGTCGCAG TCGCCTGGGG TGAGGTGAGC CTGCTCAGGG TCGTCATCAA GACGGGGAGA ACCCACCAGA TCCGGGTTCA TCTGAGCCAT ATGCAACATC CGGTGGTCGG CGACGAAACC TATGGCGGCG GAAAACGGAA AGCTCGCGCG GTCAAATCCG ATGTCCTGCG AGAGCTGTTG ATGGAGGTGG ACCGCCAAAT GCTTCATGCG GTCGGATTGG CGTTCCGGCA CCCCGTTTCC GGAGCGGACC TCTCATTCAC GGCACCGCTG CCGCCCGATT TTGCCGGTCT GCTCGAACGA ATAAGGATTT CGCTCCAGAA AGAAGGAGCG GGCCGTTCCG ATCCATCAGG GGTTGGGATG GATAAGCTGC CTTAG
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Protein sequence | MGTRNSPPDL TFHVDVEEKL RRLDVFLSAR SPDCSRSQVQ KLIREGRVTV NGLPVKASYE IRSGDCIAVW LPEAVGEDSL QPRPMPLEIL FEDDDVLVLN KAPGVIVHPG AGHEEGTLVH GLLAHCSRLA SRGAPRRPGI VHRLDRGTSG ALMVAKSERA YLELIRQFKH HEVGKEYLAL VYGTMAGASG EIRTGMGRHP VDRKRMAVLE KGGREAVSQW KVAVAWGEVS LLRVVIKTGR THQIRVHLSH MQHPVVGDET YGGGKRKARA VKSDVLRELL MEVDRQMLHA VGLAFRHPVS GADLSFTAPL PPDFAGLLER IRISLQKEGA GRSDPSGVGM DKLP
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