Gene Sfum_3600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3600 
Symbol 
ID4458091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4410118 
End bp4410639 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content57% 
IMG OID639704371 
ProductFe-S cluster domain-containing protein 
Protein accessionYP_847705 
Protein GI116751018 
COG category[S] Function unknown 
COG ID[COG4871] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.455645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTCA AAGGTTACCG TAAGGAGGTG GTTCGCCCGG AATGCAGGCC CGAAGCCCAA 
TCAGTGCATT GCGTCGCCCA CCTGGATGAG GACATCGGCG AGGTGATCCC TTATCTCAAC
GCGGTACTGG GCGGGTTTCA ATTCACGAAG GATCCTCTTT GCGTATCGTT CAAGGTTCAT
GGGAAACTGA TCGCGGTCCA TCCTCGGAAA ATCGCCGTGA ACGCTCTGAG GGACGAGGAA
GAGGGAGACC GAATCCTTGA ATGGCTGAAG AGGGAAATCA ATGACGCCTG GGAAAGACGC
GCGGAGATAG AGCCTCGTTT CGAAGGCGCT CCCAAGCCGA AGGTCATCGA AATCCTCAGG
TTCCTGCCGA AAACGAACTG CAGGCAATGC GGGCAGCCGA CCTGCATGGT GTTTGCGACT
CAGGTGGCCG ACGGCGGCAG AGGCCCCGAG AACTGTCCTC CACTGACCCG GGAGCAGAGG
GAGACGCTTG CGAGTTACCT GGAGCGGTTT CAGTTGGAAT GA
 
Protein sequence
MLLKGYRKEV VRPECRPEAQ SVHCVAHLDE DIGEVIPYLN AVLGGFQFTK DPLCVSFKVH 
GKLIAVHPRK IAVNALRDEE EGDRILEWLK REINDAWERR AEIEPRFEGA PKPKVIEILR
FLPKTNCRQC GQPTCMVFAT QVADGGRGPE NCPPLTREQR ETLASYLERF QLE