| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3400 |
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| Symbol | |
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| ID | 4458306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4167024 |
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| End bp | 4168334 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639704172 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_847508 |
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| Protein GI | 116750821 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.41623 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0330149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGA CGCGTTCTGT CCTTTGGGCT GTCTGCCTGG CTTTGGCCGT GATTGCCGTA
TTCCGGACGG CCTGTCCTGC CGCGGAAACG ATCAAGATCG GCGTGATCTA TCCGCTGACG
GGAGGAGCGG CTGCCGAAGG CAGGGAGCTG CGAGCCGGCG CGGAACTGGC CGCCCGAATA
GCAAACGACG TGATGCCCGG CATCGACATG GACATGGCCA GAAGGGGTGG AATCACCTCC
CTGGGCGGCG CCAAAATCGA GCTGATATTC AAGGATCACG AGGGAAACCC GACGCTTGGC
GCCGACCTGG CCAAGCAGCT CATTCTGGAC AACAAAGTGG TCGGCATCCT CGGCTGTTAC
CACAGCTCCG TGACGAAAAC CGTAAGCGCC GTGTGCGAGC AGTACGGGAT TCCCATGATC
AACGATTCGT CCACCTCGCC GGCGCTGACA CAGCGCGATT TCAAATGGTT CTGGAGAACC
ACGCCTCACG ACGTGACTTT CACCAGGGAT TTGTTCGAAC TGTTGAAAGG ACTCACCGAA
GGCAAAGTCA AGGGGGTGCC CGCGGTTCCG GGGGATCAGA TCAAGAAGCT GGTCTCCGCC
TGTGAGAAAA CCGAGTGGGG TTCCCAGGTT TCGGAGACGA TCGAGGGCTT CGCCAAACAA
TATGGCTTCA TCGTTCAGAA ATCGATGCTC TATGCGGCAA AGTCCGCGGA TCTTTCGAGT
GAGGTACGGT CACTGCAAGC GGTGAAACCG GATGCGATGC TCTTTGCTTC TTACGCCTCG
GACGCCATCT TGATGGTGAA GACGCTCAAG GCACAGAAAG CCTGCGCCAA GATCATCTGG
GGGCAGAACG CGGGTTTTGA GGCCCCGGAA TTCAGATCTA CTCTGGGCGA TGACGTGGTG
GGGATCTTGA CCCGCACGGT TTTCGCTCCC AGGGTTGCCG CGGTGAAAAA AGTGTCGGGA
CAGGTGAACG AGCTTTACAA AAAGGAAATC GGGCACGATC TGAGCGGAGC ATCGGCCAGG
GCGTTCACGG GGTTGCAGAC CTGGGTGGAA ATCCTGGAAA AGGCCGGGTC GACCAAACCC
GAAGACATTC AGAAGACCGC TAACAGCATC AGCATTCCGG GAGAGCAGCT GATCGTCCCC
TGGAGGGGGA TCAAGTTTGC CGCCGCCGGC GCCGACAGGG GCCAGAACGA GCTGGGGTCG
GGGATTATCG GCCAATACCA GAAGGACAAG GACGGCAACA TCGTCCTGGA GATCATCTAC
CCGTTCGATG TGAGCACGGC GAACATGATT TATCCGTTCA AGGCTTTCTG A
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| Protein sequence | MMKTRSVLWA VCLALAVIAV FRTACPAAET IKIGVIYPLT GGAAAEGREL RAGAELAARI
ANDVMPGIDM DMARRGGITS LGGAKIELIF KDHEGNPTLG ADLAKQLILD NKVVGILGCY
HSSVTKTVSA VCEQYGIPMI NDSSTSPALT QRDFKWFWRT TPHDVTFTRD LFELLKGLTE
GKVKGVPAVP GDQIKKLVSA CEKTEWGSQV SETIEGFAKQ YGFIVQKSML YAAKSADLSS
EVRSLQAVKP DAMLFASYAS DAILMVKTLK AQKACAKIIW GQNAGFEAPE FRSTLGDDVV
GILTRTVFAP RVAAVKKVSG QVNELYKKEI GHDLSGASAR AFTGLQTWVE ILEKAGSTKP
EDIQKTANSI SIPGEQLIVP WRGIKFAAAG ADRGQNELGS GIIGQYQKDK DGNIVLEIIY
PFDVSTANMI YPFKAF
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