Gene Sfum_3349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3349 
Symbol 
ID4457631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4104327 
End bp4105421 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content53% 
IMG OID639704121 
Producthypothetical protein 
Protein accessionYP_847457 
Protein GI116750770 
COG category[V] Defense mechanisms 
COG ID[COG2348] Uncharacterized protein involved in methicillin resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAATAG TCCTTGCGCG CTACGGTGAC CCTGATGCCA AGAAGCTTCT TGCGGGCATT 
GACGAGAGGT ATCCTTTTCC TTTTCTCGAA TCCTACCACA ACTACTTGCG CGATTGCCGA
AGGGGCGACC CTGTTTTGGC TTTCTCCGAA GATGGCTTCT CATGCATTCC TTTAAGGATG
TTCCGGATTC GCGTCTTCCG TTTCGCCGAA TTGATGTTCC CCCCTGTGCA CGACGGAGAG
ACTTTGGACG CGGAGAAAGA AGCGGATTTC ATATCGACTC TGGTGACCTC ACTCACAAGG
TTGAAATGCT GTGACAGGCT TATTCAGCCG CCTCCGCACT GCCTGTTTCG CTCTGTCCCG
AAAGGCGCGA CTGCCTGTGG TTTCGGAAGT TATGTTCTAC AATTGGAAGG GAGATCCGAG
GACGACTTAT TCGCCGGCTT GCACAGCGAT CATCGTCGCA AAATTCGCTT GGCTGCGAAA
GCGAGATTGC ACGTTGATTT CGGCTTCCAC CGTGTTAACG ACTTTTACGC GCTCTACTCG
CGGACAATGC AGCGTTCGAA CATGCCTCAC GTGAGTTTCA GCGAATGCGC TCGGTTCCAT
GAACGATTGG CCTCCTCCAA TAACGTTTTG TGTGGCATGG TGTACCATGG CGAATCTCCA
CTTGGAGGGC TTCTGATTCC CTACACCCGA CAGGGTGCAT ACTATTTGTA CGGCGCCTCT
GCTGAGGAGG TGACCGTGGC GGGAGCGATC AAGCTGCTTC ATTGGGAGAC AATTCGGCTA
CTCATGCATC ATGGAGTGAA ACGATACAAC TTCGTTGGAA CCCGGTTGAG CGACGTTTGC
GGTTCAAAGC TTGAGCACAT CCAACGCTTC AAGTCCCGTT TCGGCGGTGT CCTGGAAACC
GGGTACCTTT GGAAAATGGA CCTCCTCAGG CAACGGGCAC GGATTTTCGA CTTTTTGGTC
GGGCTGCGGA AGAAGACCAG CTGGAATAAG CATGCAACAG CGAGGGACAT TATCGATCAA
GAACGGCTGA AGTCAGAAAC CAAGACCGCC GCCCCTCATA CCCTCTCCCC GACACAGCGA
AACCGAGCTC TATGA
 
Protein sequence
MTIVLARYGD PDAKKLLAGI DERYPFPFLE SYHNYLRDCR RGDPVLAFSE DGFSCIPLRM 
FRIRVFRFAE LMFPPVHDGE TLDAEKEADF ISTLVTSLTR LKCCDRLIQP PPHCLFRSVP
KGATACGFGS YVLQLEGRSE DDLFAGLHSD HRRKIRLAAK ARLHVDFGFH RVNDFYALYS
RTMQRSNMPH VSFSECARFH ERLASSNNVL CGMVYHGESP LGGLLIPYTR QGAYYLYGAS
AEEVTVAGAI KLLHWETIRL LMHHGVKRYN FVGTRLSDVC GSKLEHIQRF KSRFGGVLET
GYLWKMDLLR QRARIFDFLV GLRKKTSWNK HATARDIIDQ ERLKSETKTA APHTLSPTQR
NRAL