Gene Sfum_3345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3345 
Symbol 
ID4458338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4099684 
End bp4100409 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content34% 
IMG OID639704117 
Producthypothetical protein 
Protein accessionYP_847453 
Protein GI116750766 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.833055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTTCAT TCAAGTATCT TGGGATAAGG CACAAGTGCC CGTTTTGCGG AGGACATTTT 
TCCACATTGT TGCCATGTGG ATTGAGTGTT CCAGTTCTGA AGGCTAAACA AGTCATAGGC
GGCGGTTATA GACTCAATTC CATATGCCCA CGCTGTCATT CGTGGGACAG AGAGCGTTTT
GTATATCTTT TCCTAAAAAC CTATAAAGAA TATATTTACA ATAAACCTAT AAATGTATTG
CATGTTGCAC CTGAATTAAA TCTAAGTAGA AAATTAAGAT CTTTACCATA TATTAGATAT
ACTACGGCAG ACCTATATTC ATCATCAGTT GATATGCAAA TGGATATCAC TGATATTAAA
CAAAAAAATG AAAGTTATGA TTTAATAATA TGTAATCATG TATTGGAGCA TGTTCCAAAC
GATAGAAAGG CTATGAGTGA ATTGTATCGA ATCTTGAAAA AAAATGGACT GGCTATTCTT
CAGGTTCCAA TATCCTATTC AATGGAAAGA ACTATTGAAG ATTCATCAAT AGAAAGTCCA
TTGGAAAGAT TGATTGCGTT CGGACAAGAT GATCATGTTC GTATATATGG ACTAGATTAC
ATATTGAGGC TTAGACAAGT TGGATTTCAT GTAGAAGTCA ACAGATGTTC ACATTTATTC
AGTTTGGAAG ACATAAAGAA ATATGGACTT ATCATGGATG AGAGCATATT CTGTTGTTCA
AAATAG
 
Protein sequence
MASFKYLGIR HKCPFCGGHF STLLPCGLSV PVLKAKQVIG GGYRLNSICP RCHSWDRERF 
VYLFLKTYKE YIYNKPINVL HVAPELNLSR KLRSLPYIRY TTADLYSSSV DMQMDITDIK
QKNESYDLII CNHVLEHVPN DRKAMSELYR ILKKNGLAIL QVPISYSMER TIEDSSIESP
LERLIAFGQD DHVRIYGLDY ILRLRQVGFH VEVNRCSHLF SLEDIKKYGL IMDESIFCCS
K