Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3315 |
Symbol | |
ID | 4458343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4056903 |
End bp | 4057631 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639704087 |
Product | HAD family hydrolase |
Protein accession | YP_847423 |
Protein GI | 116750736 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.354727 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAAATG TTTTCGACGT GGGAGCCTCT TTTGAGCTTC AAGCGGTCAT ATTCGACTGC GACGGCGTGC TCGTCGACAG TGAACCCCTC CACTATCGGG CGCTCCAGGA GGTATTGAAA CCCCTGGGCC TCGGTCACGA CTACGCCCGC TACCTGGAGC ACTACATCGG TTTCGATGAC CGGGACGCTT TCCGGGAGGC CTTTCGAGAA GCCGGACGCG ACCTGGATGG GCGCACCCTG GCCGAGCTCG TCGATGCGAA GGACGGAGCG CTGCGGAAAA TCGTCGCCGA TGGAGTGCCC ACCTTTCCGG GGGTCATCGA ATTGGTCCGG GAGCTCCACA GCCACAATGT GCTTCTGGGT GTGGCATCCG GTGCGCTGCG CCATGAAGTG AGCGCATTCG TGGCTTCCCT TGGGCTGCAG GATTGTTTTT CGATCCTGGT CGCCGCCGAT GACGTGGAAC GGAGCAAACC CGATCCGCAA ACCTACATCA AGGCCCTCGA CGAGGTCAGA GTCCTTGGCG GGCACGCTGT TCTCGACGCG AGGAATTGCG TCGCCGTCGA GGATACTCCG GCCGGTATCC AATCCGCCAG AACGGCCGGC ATGTATGTTG TAGGGATCAC CAATTCCTTC CCGCGGGGGA GCCTCGAGGA TGCAGACCAC ATTGTCGGGA GCCTGTCGGA GCTCGACCAT GCCGGCCTGA TTCGACTGGT CCGAACCGGA AGGTCCTGA
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Protein sequence | MQNVFDVGAS FELQAVIFDC DGVLVDSEPL HYRALQEVLK PLGLGHDYAR YLEHYIGFDD RDAFREAFRE AGRDLDGRTL AELVDAKDGA LRKIVADGVP TFPGVIELVR ELHSHNVLLG VASGALRHEV SAFVASLGLQ DCFSILVAAD DVERSKPDPQ TYIKALDEVR VLGGHAVLDA RNCVAVEDTP AGIQSARTAG MYVVGITNSF PRGSLEDADH IVGSLSELDH AGLIRLVRTG RS
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