Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3245 |
Symbol | |
ID | 4458413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3975422 |
End bp | 3976366 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639704017 |
Product | UspA domain-containing protein |
Protein accession | YP_847353 |
Protein GI | 116750666 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCCG ACCAGAAGAA GAGAGCCTTG TTGGTTGTGG ACGGGTCCTA TCAGTCGTTC GAAACCGTCG GGTACGTGAG CGGGATTCTG CCCGCTTCCC GTTGCGAGCT GGTGTTGCTG CATATCAGCA GCAAGGTCCC GGAAGCCTTC TGGGACCTGG AAAAGGATCC CGTTTGGCAC CAGAAGGTCC AGACGGTCAG GGGATGGGAA AGGCAGCAGG AAAGAAAGAT CTCCGACTTT ATGGACCGTT CCAGGCAGGT TCTTGTGGAT GCGGGATTCC CCGGGGAAGC CGTCAGGGTT GAAATCCGGG AACGCCGGGA AGGCATCGCG CGGGACATCG GCAAGGAAGG GCTTCGAGGA TACAGCGCCG TGATCCTGGG GAGACGGGGC CTGAGCACCG TGCAGGACCT TTCCCTGGGT GGCGTTGCCC AGAAACTGGC GCTCAAGCTT ACCGGCACCA CGGTCTGGCT CGTGGGCGGC AAACCCGAGC AGACCGGCAT CCTCATCGGT CTCGATTCAT CCGAGGGTTC CATGGCGGCC GTGGAGTACG TAGCTGAAAT GACTCGCGGG AGCGCTCCGA AGATCGCGCT CGTTCATGTC GTCCGTTCCG TGTCGAGCGG TCAGGGGGAC GTCGAGGAAG TGTTCACGGA GGAGTACCGC GAGAAGCACG TCGAGGAAGC CACAAACCGG ATTCGACCGG TCTTTCGCAA AGCGACCGAG AAGCTGGTTG CCGCGGGGAT TCCCGCCGAC CGGATTTCCG CCAGGATCCT TTCGAAGGTG TTCAGCCGCG CGGGAACGCT CCTCCAGGAG GCCGGGCGGA TGAACTTCGG AACCATCGTG GTGGGACGCA GGGGCTTGTC AACGGTGCAG GAATTCGACA TGGGCCGCGT GAGCAACAAG CTCATGCAGG CAGCCAGGGA CCGGGCCGTG TGGCTTGTGG GCTAG
|
Protein sequence | MSADQKKRAL LVVDGSYQSF ETVGYVSGIL PASRCELVLL HISSKVPEAF WDLEKDPVWH QKVQTVRGWE RQQERKISDF MDRSRQVLVD AGFPGEAVRV EIRERREGIA RDIGKEGLRG YSAVILGRRG LSTVQDLSLG GVAQKLALKL TGTTVWLVGG KPEQTGILIG LDSSEGSMAA VEYVAEMTRG SAPKIALVHV VRSVSSGQGD VEEVFTEEYR EKHVEEATNR IRPVFRKATE KLVAAGIPAD RISARILSKV FSRAGTLLQE AGRMNFGTIV VGRRGLSTVQ EFDMGRVSNK LMQAARDRAV WLVG
|
| |