Gene Sfum_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3220 
Symbol 
ID4458458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3941234 
End bp3941728 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content55% 
IMG OID639703992 
Productrubrerythrin 
Protein accessionYP_847328 
Protein GI116750641 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.580262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCA AGTTCAATGC GGCGGAAGTT TTCAACATTG CCATCAAGAT TGAAGAGAAC 
GGGAAGAAAT TTTACGACGC CTCCCTGAAA GTCATCCAAG ATCCCGGAGT CAGGAAACTC
TTCGCGGATC TTGCCGAACA GGAGGTTGAA CACAAGAAAC GGTTCGAAGC TCTGAAGGCC
CAACTCCCGA AGAGCTCGAC CGTGAGCACG GTGTGGGATC CCGACAATGA ACTGGATCGG
TACATCAAGA TGATGGCGGA CGAGCACGTC TTCGTCACGA GTGCCGGTTT GGACCAGGAA
CTGGCCCGGG TGACCGACGT GAAGAGCGCT CTGAGACTGG CCATCGAATT CGAGAAGGAT
TCGGTGATCT TCTTCCTGGG GCTCGAGGAC GCCACCGTGA GCAAGCAGGA CCAGGAACTG
ATCAAGGCGT TGGTGAAGGA GGAGCAGGAA CACCTGAGGC GCCTGTCGTT GGAGCTCAGC
AGGATTTCCC GCTAA
 
Protein sequence
MSFKFNAAEV FNIAIKIEEN GKKFYDASLK VIQDPGVRKL FADLAEQEVE HKKRFEALKA 
QLPKSSTVST VWDPDNELDR YIKMMADEHV FVTSAGLDQE LARVTDVKSA LRLAIEFEKD
SVIFFLGLED ATVSKQDQEL IKALVKEEQE HLRRLSLELS RISR