| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3154 |
|---|
| Symbol | |
|---|
| ID | 4458529 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 3870794 |
|---|
| End bp | 3871885 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639703925 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_847262 |
|---|
| Protein GI | 116750575 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.146517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGGT TCTTGTGCGT TCTGTTCGGA GCCCTGCTCT TTGTGTCGGT GGCGGCCTTC
GGTGCCTATG CCGCGGAAGG TTTCGCCACG TATTCGATTC CCAAGGACAA GGTGAACGCC
GCGGGAAAAT ACTGGACCAA GGAAAAAATG AAAAACGCCA AACCGTACCC TTCGACCAGG
AAGAAGGGGA CCGTTCACAG GGTGCCGGCG AATACGGAAG AGCAGCTTTC GGGACCTCCC
GGCATGGACC CGGGTGATCC GGGGGAAGGC GCTCCCGGCC GCTCCGCCAG CCGGAAAGCC
GGACTCCACG GTGTCGCGGA ACCAGGGATC GGAGGGGACA CCGCGGAGAT GGTGGGAGCC
TCGACCGCCG GATACAACTA TCCCGCGCCG CACACCACGT TCCCGGTGCT GGATTCCCTC
TACGGGATTT CCACCACCCC GTATCCGTAC AGAACCATAG GGAAGATATT CTTCACGGAG
GACGGGGAGG AATACGTCTG TTCGGGGGCG TCCATCGGAG GCCGGGCGGT CCTGACGGCG
GGGCACTGCG TCTCGGACGG TGGGGGGACC TATCACTCGA ACTGGATTTT CGTCCCCTCC
TACCAGGACG GGGAAGAGCC CTATGGAGAG TGGACGGCTT TCTGGCTGGG GACGTTCCAG
GAGTATCACC AGGAGGGCGA CTGCGGTCGC GACGTGGGTT TCGCCGCGGT CAGCGACAAG
AACGGCAAGA AGCTTTCGCA GAGGGTGGGT TTCCTGGGCT TTTACTACAA TGCCAGCCGC
ACAAGACACT GGAACATGTT CGGCTATCCC GCCGACGATC CATGGGATGG AGAGTTCATG
GTGGAAACCC AGGCGTCTTA TGCATACGTC GACGATTCCG TGGTGCCTGA CGCCACCGGG
ATCGGGACCA CTCAAACCGA GGGTTGCAGC GGAGGCCCGT GGATCATGAA GTTCAAACCG
GGCCCCAAGG TCGCCGGCAC GAACTTTGCC AACGGAGTGA ACAGCTACTC CAATGAAGAC
ACCGGAGAGA TCTTTTCACC CTATTTCGAC ACGAGAGTCA AAGACCTCAA AGACAGGGCC
GTGGCGAAGT GA
|
|---|
| Protein sequence | MKRFLCVLFG ALLFVSVAAF GAYAAEGFAT YSIPKDKVNA AGKYWTKEKM KNAKPYPSTR
KKGTVHRVPA NTEEQLSGPP GMDPGDPGEG APGRSASRKA GLHGVAEPGI GGDTAEMVGA
STAGYNYPAP HTTFPVLDSL YGISTTPYPY RTIGKIFFTE DGEEYVCSGA SIGGRAVLTA
GHCVSDGGGT YHSNWIFVPS YQDGEEPYGE WTAFWLGTFQ EYHQEGDCGR DVGFAAVSDK
NGKKLSQRVG FLGFYYNASR TRHWNMFGYP ADDPWDGEFM VETQASYAYV DDSVVPDATG
IGTTQTEGCS GGPWIMKFKP GPKVAGTNFA NGVNSYSNED TGEIFSPYFD TRVKDLKDRA
VAK
|
|---|
| |